Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g02048 ATGGCTTGCACAATCGATTTTCGCCGCCTCGATGAAGGTTTCGGCGGCAAAACCTACAAACGCAAACGCGAACAAGCACAAGCAATCGAAGATGCAAAGATGCAAGAACCCGACACCATGGAAACCGATGAAATCGCTCTTCCACCAGCAAAGAGATCAGCTCTTCCATCAGCATCAGATCCAAACAAACCTTCATTTGGAGCACCAACCTACGACGGAGTAATCGCCGGTAAAGTCTCCGGCAGAAAGTGGAAGCAGGTTCGCACTCGTCGTGCTTCTGCACTTCAGGTAAGCAGAAAGGGAACAACGTTTGAAGAGAGGGAAAGAGAGAAGAAGATCAAAATGGCGTATAAGGAGAGGATTACTGAATTGAAAGAAGTGATTCGGTTGAATAAGGTTGAGAAAAGAAAGAAGAAAGAAGAAAGGGAGAAGAAGAAGAAAGAGAATATTTTGAGATCTGGTACTAAGTTGCAGATAATTTCTAACCCTAAAACTTTGAAGAAGATTGCTAAGTCTAAGAAGAGGAAGCAACTTAGGATGGTTCCTGATGATTTAGTTAAGAAATAG 567 0.4303 MACTIDFRRLDEGFGGKTYKRKREQAQAIEDAKMQEPDTMETDEIALPPAKRSALPSASDPNKPSFGAPTYDGVIAGKVSGRKWKQVRTRRASALQVSRKGTTFEEREREKKIKMAYKERITELKEVIRLNKVEKRKKKEEREKKKKENILRSGTKLQIISNPKTLKKIAKSKKRKQLRMVPDDLVKK 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g02048 188 Coils Coil 124 150 - -
Trre13g02048 188 MobiDBLite consensus disorder prediction 22 40 - -
Trre13g02048 188 PANTHER UNCHARACTERIZED 1 187 IPR026570 -
Trre13g02048 188 MobiDBLite consensus disorder prediction 167 188 - -
Trre13g02048 188 Pfam Cgr1 family 77 177 IPR005579 -
Trre13g02048 188 MobiDBLite consensus disorder prediction 22 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g02048 Trre-Chr13 17735854 17736420 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g02048 - - psat:127126757 272.707
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g02048 13 17735854 17736420 Trre13g02048 13 17735854 17736420 ECH