Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g02046 ATGCAGACAGCTCTAACCTTTGCAACCACTACCTTTGTGCCTTTGACAACACCAAAGAGTGTCTCACATCTTACAACTAGTTTCCCTACCAAATTGATTGCCTCACGATCTTCTCCACCTCGTTACACTGCAATCAAAGTTGCAACTGACAACTCTGACCCTTCAACAGTCAATTACAACTCTGCATTCTCAGTGTTTCCAGCTGAGGCATGTGAAACTGTTGGAGGAGAAGCCTGTTCGGCAGACATGTATCCTGAAGTGAAGCTGCAACCTGATCAAGCAAAGAAGGACACACCAAAGGCTGCATCTTCAGAGAACACTGATAGAGAGTATCTTGAATATAATGACCCTAAAACGGTTTTCCAAGCAGAGGCTTGTGATGATCTTGGAGGAACTTTCTGTGAGCCTGATTATCAAAAAGGTGTCTACTAG 432 0.4398 MQTALTFATTTFVPLTTPKSVSHLTTSFPTKLIASRSSPPRYTAIKVATDNSDPSTVNYNSAFSVFPAEACETVGGEACSADMYPEVKLQPDQAKKDTPKAASSENTDREYLEYNDPKTVFQAEACDDLGGTFCEPDYQKGVY 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g02046 143 PANTHER LIGHT-REGULATED PROTEIN 1, CHLOROPLASTIC 1 142 IPR009856 GO:0009507
Trre13g02046 143 MobiDBLite consensus disorder prediction 90 116 - -
Trre13g02046 143 MobiDBLite consensus disorder prediction 90 115 - -
Trre13g02046 143 Pfam Light regulated protein Lir1 1 135 IPR009856 GO:0009507
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g02046 Trre-Chr13 17720442 17721374 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g02046 - - mtr:11436793 238.424
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g02046 13 17720442 17721374 Trre13g02046 13 17720442 17721374 ECH