Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g02045 ATGAGACAACACAAGCAATCACCATTCGCGAGACCGAAGATTCTATATCTGGTGTGTGCCGTTGCATTGTTCTCCCTTCTCCTCTTCTCCATTCAATCCTCTTTCTTCACCGGTTCCTTCTATTCAGATCCTCGCACCTCCGAATCAATTCGTGACTTGTTTCAATTTCAGTCCACTGTTCAGCAATGTGTGGCTAATAGGGGGCTTGGACTCACTGCAGATATTATTGATCACTGCACATTGGTCCTTAAATACCCTGAAGGCACCAACAGCACTTGGTACAATCAGCAATTTAAAAAATTTGAGCCTTTGGAGTACACATATGATGTGTGTGAGGCAATACTATTATGGGAACAGTATCGTAACATGACCACAGTGTTGACAAGGGAGTATCTTGATGTTCGTCCTGGTGGTTGGTTAGATTATGCTCCATTAAGGATAGCACAACTGGGGGCAAAGAAGTGCTACAATAAGACTCTTTGTGAAGAGCAGCTTAATGTATTATTACCTGCAAAACCCCCCTTTCATCCAAGGCAGTTTCGTACTTGTGCTGTTGTTGGGAATTCTGGGGACCTTCTGAAGACAGAATTTGGGAAAGAAATTGATGGTCATGATGCTGTTTTTAGAGACAATGAGGCCCCTGTTAATGAGAAATATGCCAAATACGTTGGTCTTAAGAGGGATTTCCGTCTAGTTGTAAGAGGTGCTGCTCGCAACATGGTTCCTATTCTAAATGGGTCTGATGATGAAGTACTCATAATCAAAAGTCTGACACACAGAGAAATCAATGCAGTTATAAAGACTCTACCAAATCCAGTCTACCTCTTTCAAGGTATTGTACTACGTCGAGGTGCCAAAGGAACTGGAATGAAATCTATTGAATTAGCGCTGTCCATGTGTGATATTGTTGATATATATGGTTTCACTGTTGATCCTGGATACACTGAGTGGACAAGATACTTCTCTGCTCCTAGGAAAGGACACAATCCACTTCAAGGAAGAGCATACTACCAACTTCTAGAATGTCTTGGGGTAATCAGGATTCACTCCCCCATGAGATCCATGAGGAGGCAAGACTGGTCAGATGTGCCAAGTAGAGAAATGATAAGCCAAGCACATGCAGCAGCTTGGCACTTGAGAAAGAGTTCAGCCGACAAGGGTGGTGGTAAAGGACAGTTTGGCAATTGTAAGGTCTGGGGGAATGTCGACCCGGACAAAAGTGGACCTATCTCGGGATCACCAGACATGAGTGATGTCAGGAAGTATTCAAATTATAAAAAATGGGAAGTCATGCCTTTGAAAAGTTTGAGGAAAGAAGCACAGCTTCACTATAAGCAGATGGAAGGGGTCTCTCAATATAAAATGGATGGCAATAAGTTGGATGATCTAGTGTGTGTGAGACACTCCTTAAAATCTGCGGTGTAA 1425 0.4288 MRQHKQSPFARPKILYLVCAVALFSLLLFSIQSSFFTGSFYSDPRTSESIRDLFQFQSTVQQCVANRGLGLTADIIDHCTLVLKYPEGTNSTWYNQQFKKFEPLEYTYDVCEAILLWEQYRNMTTVLTREYLDVRPGGWLDYAPLRIAQLGAKKCYNKTLCEEQLNVLLPAKPPFHPRQFRTCAVVGNSGDLLKTEFGKEIDGHDAVFRDNEAPVNEKYAKYVGLKRDFRLVVRGAARNMVPILNGSDDEVLIIKSLTHREINAVIKTLPNPVYLFQGIVLRRGAKGTGMKSIELALSMCDIVDIYGFTVDPGYTEWTRYFSAPRKGHNPLQGRAYYQLLECLGVIRIHSPMRSMRRQDWSDVPSREMISQAHAAAWHLRKSSADKGGGKGQFGNCKVWGNVDPDKSGPISGSPDMSDVRKYSNYKKWEVMPLKSLRKEAQLHYKQMEGVSQYKMDGNKLDDLVCVRHSLKSAV 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g02045 474 Gene3D Glycosyl transferase family 29 272 351 IPR038578 -
Trre13g02045 474 Gene3D Glycosyl transferase family 29 146 271 IPR038578 -
Trre13g02045 474 Pfam Glycosyltransferase family 29 (sialyltransferase) 168 239 IPR001675 GO:0006486|GO:0008373
Trre13g02045 474 PANTHER SIALYLTRANSFERASE-LIKE PROTEIN 1 1 472 IPR044782 GO:0008373|GO:0009846|GO:0009860
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g02045 Trre-Chr13 17713122 17719436 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g02045 59 345 Glycosyltransferase AT1G08660 86.063 0.0 532
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g02045 - - gmx:100527382 824.313