Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g02037 ATGGAAGATAGTTTCAGAGTTCGAGTAGAGAAAGCTTTCGGTTCTCTTCCAATACCTTCTTCCGCTTCTCTTTGGTCTCTCTCCGAAGACGAAATCAACGACAAACCCGAATCCGAACCAAAACCCTACCCAACTTCTTCCGGTGTCAAACCTCAGCTTCAAAACGATCTCGACGAAGATGAAAACGCCGCCGGTCCTTCTAAACCGTCCGATTACAATGATGAACAGTGGGAGATTAGGTCTTCTATTGGCCTCGATCCTACCCTCGATTTTGAGGATGAGGAAGATCATTATGACAAACAGGCTCTTGGTAAAGAGAACACAGGGGATCGTTTGTATATGAGCGAAATAAATGAAGATGGAATTGGCATAAGTTCTCGTGTGTTTGGAGATTTTTCGAGAGATCCGCGAGCTAATCACATGGCTGCTAGGATTAAGCTGAAGCAAGATGATGAAGCGGCTAAAAAAATTGATACTTTGCAAGTCTCTGAGAAATCTACACCGGACATTGGTGGTAGTGGGGCTGATGCTGTTAACCCAAAATCAATTTTGAAGAGTAAAGATAATCCTTCAGAGTCTAGGTCCAATAAACGTGTTCGGTTTGATTCTGAATGTGACGATAGAGATGGTAATGATGGTGATGATGATGGTGATGAGAAGGAAGGGACCAGGGATGTTCGCATGAAGACCTCTTCAATGGAAGAGGATGCAGCTTTAAACCAGCCATCAAAGTTAAAGGAATTTTCCTCAGCAGTTCCTGATTATATTCGCAATCCTTCAAGATACACACATTATACATTTGATTCTTCAACCGACATGGATGAGAAAGCAAATAAGGAGGCATACATGAGCTTCCTTGCACAGATAAAAGCTTCAAATGCATCAACACAGACAGATGAAGCTTTGGATGATCTTCCATCAGTTACCTTTATACCAAAGAAGAAATCTGGTGATGTCACTATGGGAGAGAATGAGACAGCATCAAAGCTAAAGCTTGACGTTGTCAAGGAGGGTGCGAATAAAAAAGCCTTCCCTGTTAGCATAGCTGTTGATGATGACACTGAAACCAGTGATGTATGTGCAATGGAGGAGGATGAACAGGAAGTTATCGAGGATACTAAAAAAAGCTCTCAGAAGTCAACCCGCAAGTACAGGAAGAAAACCGAGGATATTTTGGAGGAGCCTGCTGTGTAA 1194 0.4255 MEDSFRVRVEKAFGSLPIPSSASLWSLSEDEINDKPESEPKPYPTSSGVKPQLQNDLDEDENAAGPSKPSDYNDEQWEIRSSIGLDPTLDFEDEEDHYDKQALGKENTGDRLYMSEINEDGIGISSRVFGDFSRDPRANHMAARIKLKQDDEAAKKIDTLQVSEKSTPDIGGSGADAVNPKSILKSKDNPSESRSNKRVRFDSECDDRDGNDGDDDGDEKEGTRDVRMKTSSMEEDAALNQPSKLKEFSSAVPDYIRNPSRYTHYTFDSSTDMDEKANKEAYMSFLAQIKASNASTQTDEALDDLPSVTFIPKKKSGDVTMGENETASKLKLDVVKEGANKKAFPVSIAVDDDTETSDVCAMEEDEQEVIEDTKKSSQKSTRKYRKKTEDILEEPAV 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g02037 397 MobiDBLite consensus disorder prediction 18 109 - -
Trre13g02037 397 MobiDBLite consensus disorder prediction 368 397 - -
Trre13g02037 397 MobiDBLite consensus disorder prediction 187 207 - -
Trre13g02037 397 MobiDBLite consensus disorder prediction 145 159 - -
Trre13g02037 397 PANTHER TUMOR SUPPRESSING SUBTRANSFERABLE CANDIDATE 4 TSSC4 1 390 IPR029338 -
Trre13g02037 397 MobiDBLite consensus disorder prediction 145 244 - -
Trre13g02037 397 Pfam Tumour suppressing sub-chromosomal transferable candidate 4 241 299 IPR029338 -
Trre13g02037 397 MobiDBLite consensus disorder prediction 363 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g02037 Trre-Chr13 17642765 17644479 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g02037 - - gmx:100820108 474.167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g02037 13 17642765 17644479 Trre13g02037 13 17642765 17644479 ECH