Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g01801 ATGGAAGCGCAAGTGATGAAAACGACGACGTATCAAACTGAACCGGGTTCATCAAAGAACAGTTTCAGAACCGAGATTGATACTTCTGCTCCATTTGAATCGGTTAAAGAAGCTGTTAACCGTTTTGGTGGTCTTGGTTATTGGAAACCCTTTCTCAATAATACTAATCATTTTTCATCTTTCATTCCTCATCATTCTAAGTACCATGTAGAAGAGATTGATCGAGAGAAACTGGAGGAGCAGGCTAGAGTGCTGGAGCAAGAACTGAACCTGAAAGAAAGGGAAACTCTTGATGTGTTGAAAGAATTGGAAAAGACCAAAGGGCTTGTTGAAGATTTGAAATCGAAGCTGCGGAAGGAAGAATCTGAAGCAAATCTACATCTTGGGATGAATGTGTGTGATCAAAGATCGATTGTAGATGAGAAAGAAACGAAGGAATACGGATCGAGTCCGTCTGAAGTTCTTCAACCTACGATACCTTCCCATGTATCTTCTCCGAACTTAATATTAATGGAATTGAAGCAGGCCAAGTTGAACCTAACCAAAACTACTCATGATATTGCCGATGTACGAGCTACTGTTGAATTTCTTAATAAGAAATTAGAGAATGAAAGGATCTCACTTGAGAAAACTCGTGAAAGGTTAACTCAAAATTGTTCAAAAGTGTCTTCTCTTGAAGATGAGCTAAACCAAACCAGATTAAGATTGCAAGTTGTTAAAGGTGATCCTTCAGATGTTACAATAGAGCTCCATCGAATGAGTTCTGAGGCCGATCGTTTCAGAAAAATGAGAGATTCCGCAGAATCAGAAGTTTTGGAAACAATGTCTGAGATTGAGCTGACAAAAGCTATGATAAAAACTGCAGAAATCAGGTTAGTTGCGGCAAGGAAAATGAATGAAGCTTCTAGAGCTGCAGAAGCTGCTACCCTTGCAGATATTAACGCGTTGTCTAACTCTAACCATGATGGTTCACTAGGAGAATGTATGCAAAAGTCCGAGGAAATTACTCTTTCATTGGAAGAGTTTACTACTCTAATCCGTAAAGCTCAAGAAGCGGAGGAACAATCAAAGAATAGAGTAGCAGAAGCTATGCTTGAAGTTGATGAAGCAAATTCATCGCAAATGGATATTTTGAAAAGGATACAGGAAGCAGCAGAAGAAGTTAAAACCCGCAAGAAAGCCCTTGAAGAAGCTTTACAAAGGGTAGAAGATGCAGATAGAGGGAAGCTAGAAGTTGAAGAGGCTTTAAGGAAATGGCGATCTGACGGTCACAAAAGGCGTTCTTTGACGAATAGCTGTATGAAGTTCAAAAACTCTGGTCCATCTGATCATCGGAGAGATATTAGGTTACTTGATGTAAATGGATTGAATTTGGTAAACGATGAAGCCAAGCCGGTTTTAAAGTCATCTTTATCAATAGGACAAATACTGAGCCAGAAGCTGCTTGCACCAGAAGAGTTTGAAGAGGGGATAGTTCAAGGCGAAAGAATCTCAGTGAAACGGTCGGAGTCATTAGGTCAGATGCTTGGCAAAGACAATGATGGTCCATTGTTTGATAAGCAAGTCGAGAAAGAAAATGGTCGGAAGCAGTTTTCTACTATGAGAAAGAAATTCGGGTTTGCAAGATTCTCTCGTCTTTTGTCAAAAAAGCATAAAAAGAAGAATAATCCAATGCTGAATTTGAGGTGA 1689 0.3955 MEAQVMKTTTYQTEPGSSKNSFRTEIDTSAPFESVKEAVNRFGGLGYWKPFLNNTNHFSSFIPHHSKYHVEEIDREKLEEQARVLEQELNLKERETLDVLKELEKTKGLVEDLKSKLRKEESEANLHLGMNVCDQRSIVDEKETKEYGSSPSEVLQPTIPSHVSSPNLILMELKQAKLNLTKTTHDIADVRATVEFLNKKLENERISLEKTRERLTQNCSKVSSLEDELNQTRLRLQVVKGDPSDVTIELHRMSSEADRFRKMRDSAESEVLETMSEIELTKAMIKTAEIRLVAARKMNEASRAAEAATLADINALSNSNHDGSLGECMQKSEEITLSLEEFTTLIRKAQEAEEQSKNRVAEAMLEVDEANSSQMDILKRIQEAAEEVKTRKKALEEALQRVEDADRGKLEVEEALRKWRSDGHKRRSLTNSCMKFKNSGPSDHRRDIRLLDVNGLNLVNDEAKPVLKSSLSIGQILSQKLLAPEEFEEGIVQGERISVKRSESLGQMLGKDNDGPLFDKQVEKENGRKQFSTMRKKFGFARFSRLLSKKHKKKNNPMLNLR 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g01801 562 Coils Coil 100 123 - -
Trre13g01801 562 Coils Coil 250 270 - -
Trre13g01801 562 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 25 125 - -
Trre13g01801 562 Coils Coil 194 218 - -
Trre13g01801 562 Pfam Weak chloroplast movement under blue light 24 124 IPR008545 -
Trre13g01801 562 Pfam Weak chloroplast movement under blue light 171 426 IPR008545 -
Trre13g01801 562 Coils Coil 68 95 - -
Trre13g01801 562 Coils Coil 339 366 - -
Trre13g01801 562 Coils Coil 222 242 - -
Trre13g01801 562 Gene3D - 168 322 - -
Trre13g01801 562 MobiDBLite consensus disorder prediction 1 23 - -
Trre13g01801 562 Coils Coil 378 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g01801 Trre-Chr13 15245068 15248455 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g01801 - - gmx:100783770 639.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g01801 13 15245068 15248455 Trre13g01801 13 15245068 15248455 ECH
Trre13g01801 13 15245068 15248455 Trre7g00830 7 5537949 5540015 PCT