Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g01800 ATGTTTAGTTCCAAATCTGAGCAACAACAAAAAACTATCCTCCAAATCAAGCAAGATGACAAGTTTTTCTGCAGACTTCTAACAAAAGAAAGTTCCATATCCAATCCATCTTTTAGAGTAGCTATTACTGTACCCTTTGTATGGGAATCTCAACCTGGCACACCCAAATACACATTCTCTGAAAAAATTCTACCTCCTCTTACTCCTCCACCTTCTTATTATTCATGCAAAAAAATACCAACTAAGAAAAATTCAAGATCCAATCTTTTTCTTGCACTTTTTCCAAAACTAAATCTTAAAAAAACTATTAAATCTTCATCGTCTTCGTCACCTTTGAATTCACCTTATTATTCTTCTTACTCCGACTCATCAACAACATCATCATCGTCGTCTTCGTCGTCATCAACCAAAGTTGTTCCTAGAAGGAGACGTTTCTTAAGCTATGGTTCATCTTTTGATTTAAGAGGAGAAGAAGAAGATGCTACTTCACCTACTTCAACACTATGCTTTGGTCTTACTCGTTCAACTAGCACTATGGCTAATAGTGGATTCCTAGGATTCTCCAAAAGTGAGTTTGACGAAGTCACGGTATCAGTGTGA 600 0.3633 MFSSKSEQQQKTILQIKQDDKFFCRLLTKESSISNPSFRVAITVPFVWESQPGTPKYTFSEKILPPLTPPPSYYSCKKIPTKKNSRSNLFLALFPKLNLKKTIKSSSSSSPLNSPYYSSYSDSSTTSSSSSSSSSTKVVPRRRRFLSYGSSFDLRGEEEDATSPTSTLCFGLTRSTSTMANSGFLGFSKSEFDEVTVSV 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g01800 199 PANTHER OS05G0165500 PROTEIN 12 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g01800 Trre-Chr13 15225873 15226542 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g01800 - - mtr:11436404 264.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g01800 13 15225873 15226542 Trre13g01800 13 15225873 15226542 ECH
Trre13g01800 13 15225873 15226542 Trre7g00831 7 5580271 5580846 PCT