Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g01734 ATGAATAGGAAGAAAACACCAATTTCTTCTTTAACTGGGAATCAGCTTTATTCTCCTAGTCCTAATCCATCCTTTGGAAGGAATTTGACAAAGGATCAACTTGGGGGAGTAATATTTGGATGCAAGAATGCGACGATTCAAGAATGTTTAACGAAACAACTATTTGGCTTACCGGCTGTACACTTCTCTTATGTGAAGAATATTCATCCTGGTTTGCCTCTGTTCCTGTTTAACTATAGTGACAGGACGATTCATGGAATTTTTGAGGCGGCGGGTAATGGAAGAATGTATATAGACCGCTATGGATGGACTGATGGTTCGGACGTGACACAGTTTCCTGCACAAGTGCAGACGAGACTTCAATTACGCTGCCGGCCACTAACTGAAGAGAAATTTAAACATGTAATTGCCGAGAACTACTATGTTCATAACCATTTCTGGTTTGAACTTGACCATGGACAAACAAGCCGGCTGATTGGCTTATTGAAACCATTGGCAATTGCACCTGCTATTTCTTCCAAACCCTTGGCAATCGCACCTGCCAATTCTTCCAAACCCTTGGCAATTGCCTCTCAGAATACAAATCTATCCCAATCTCTTCCATGGCACGATCCGTCATGGAAATCTAAAACCTTCAAAATTCCCGAATCAAAGTCAGAGGAGCACCATTCTACCCGGTCAAGTTTGATATCATGTTCTGACAGTGATTTATTAGATGAATGCTTTAAGCCATTGGACACCTTGGATACCCATTCAACTGATAAGGAGGAATCAGCACAAAATGAGAAGGACCTCGTATGGAGGAAACTAAAGGAATTGGCTGTTGCTCGTGAAAACCAGAATCTATGTTGGGATAACAATGTAACTGATACTCCTTATGCGGATGAGAATTGGTCTGATGAAAAACATTCAGAGGAGAAGGAAGATAACCCCAGTTATCCATCTGAGAAGGAGGAGAATTTCAGCCATCCATCTGAAAAGGAGGAGAATTTCAGCCATCCATCTGAAAAGGAGGAGAGTTTCAGCCATCCATCTGAAAAGGAGGAAAATTCTAGCTCTCAATTTGAGCATCAATTCAATATAGCTCAGTTGATGCAAGAGATAAAAGCACTGGCGGATTTTAAAACAATGCAAGCTGAAAAAAATAATTCCCTGGAGCAAAAGCTGAAAGAGGCAGAGTCGCAAATTCAGCTTCTGAAAGACCGTTGTGCGCTGCTGGAATCTACACGTGATATTCCTCCAACACATGTTGAGGAGACATTAATCGATCCAATCGCTGAGCTGCATTTAGATGCCAGAGATTCATTTTTTTTAATAGGCGGCTCAGATGGAGAATCGCCGTTAGCAGCCATGGATATGTATTGTACTTCTCAGAATGTGATCAAATCTCTCAAGCCTATGAGCTGTCTCCGATCATATGCTTCAGTTGTAGAGTTGAATGGTGAGATTTATGTTTTCGGTGGTGGAGATGATTGTGTTTGGTTTGACTCAGTCGAATCATACAACCCAATTTATGATAACTGGACCTTGTGTCCCTCTATGAACCGAAAGAAAGGTAGTTTGTCTGGTGCTGCTTTGGATGGCAAAATATTTGCTGTTGGAGGTGGCAACGGTACCGAGTCCTTCTCAGAAGTTGAAATGCTAGATTTTGACGTCGGGCGGTGGATTCCCACACGTTCAATGCTAGACAAGAGATTTGCTCTCGCGGCTGTGGAACTCAATGGTGCAATTTACGCCACTGGTGGATATGATGGAAAGTACTATTTAAACTCTGCAGAAAGATTTGATCCTAGGGAACATGCTTGGTCGAAAATAGCAAACATGAATACAAAACGGGGCTGTCATGCACTAGTTGTTATATATGAAAAATTGTACGCATTAGGCGGCTTTGATGGAGAAACAATGGTTTCAAGTGTTGAAATCTTTGATCCTCGTCTCGGGAAATGGATGGCAGAGGAAACAACAATGAATCATGCTAGGGGCTATTTTGGCGCCGCAGTTGTCCAAGATTCCATCTATGTGATTGGGGGTGTTAATAATGGTTGTCAGACACTGGTAGATACTGTTGAGAATTATAAGGAAGGTAAAGGATGGGAGGAAGTTTATACATCAAAAAGTGTGAAGAGGTGTTTCATGTCAACTATTGCATGCAGTCATTAA 2160 0.4181 MNRKKTPISSLTGNQLYSPSPNPSFGRNLTKDQLGGVIFGCKNATIQECLTKQLFGLPAVHFSYVKNIHPGLPLFLFNYSDRTIHGIFEAAGNGRMYIDRYGWTDGSDVTQFPAQVQTRLQLRCRPLTEEKFKHVIAENYYVHNHFWFELDHGQTSRLIGLLKPLAIAPAISSKPLAIAPANSSKPLAIASQNTNLSQSLPWHDPSWKSKTFKIPESKSEEHHSTRSSLISCSDSDLLDECFKPLDTLDTHSTDKEESAQNEKDLVWRKLKELAVARENQNLCWDNNVTDTPYADENWSDEKHSEEKEDNPSYPSEKEENFSHPSEKEENFSHPSEKEESFSHPSEKEENSSSQFEHQFNIAQLMQEIKALADFKTMQAEKNNSLEQKLKEAESQIQLLKDRCALLESTRDIPPTHVEETLIDPIAELHLDARDSFFLIGGSDGESPLAAMDMYCTSQNVIKSLKPMSCLRSYASVVELNGEIYVFGGGDDCVWFDSVESYNPIYDNWTLCPSMNRKKGSLSGAALDGKIFAVGGGNGTESFSEVEMLDFDVGRWIPTRSMLDKRFALAAVELNGAIYATGGYDGKYYLNSAERFDPREHAWSKIANMNTKRGCHALVVIYEKLYALGGFDGETMVSSVEIFDPRLGKWMAEETTMNHARGYFGAAVVQDSIYVIGGVNNGCQTLVDTVENYKEGKGWEEVYTSKSVKRCFMSTIACSH 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g01734 719 Gene3D - 425 602 IPR015915 GO:0005515
Trre13g01734 719 MobiDBLite consensus disorder prediction 285 355 - -
Trre13g01734 719 SUPERFAMILY Kelch motif 435 713 IPR015915 GO:0005515
Trre13g01734 719 Pfam Development and cell death domain 35 161 IPR013989 -
Trre13g01734 719 Gene3D - 603 719 IPR015915 GO:0005515
Trre13g01734 719 Pfam Kelch motif 568 609 IPR006652 GO:0005515
Trre13g01734 719 Pfam Kelch motif 471 515 IPR006652 GO:0005515
Trre13g01734 719 Pfam Kelch motif 659 692 IPR006652 GO:0005515
Trre13g01734 719 Pfam Kelch motif 612 650 IPR006652 GO:0005515
Trre13g01734 719 Pfam Kelch motif 523 561 IPR006652 GO:0005515
Trre13g01734 719 SMART kelc_smart 435 481 IPR006652 GO:0005515
Trre13g01734 719 SMART kelc_smart 623 670 IPR006652 GO:0005515
Trre13g01734 719 SMART kelc_smart 576 622 IPR006652 GO:0005515
Trre13g01734 719 SMART kelc_smart 482 528 IPR006652 GO:0005515
Trre13g01734 719 SMART kelc_smart 671 719 IPR006652 GO:0005515
Trre13g01734 719 SMART kelc_smart 529 575 IPR006652 GO:0005515
Trre13g01734 719 PANTHER - 26 715 IPR044832 GO:0034976
Trre13g01734 719 MobiDBLite consensus disorder prediction 1 23 - -
Trre13g01734 719 MobiDBLite consensus disorder prediction 295 353 - -
Trre13g01734 719 SMART dcd 32 164 IPR013989 -
Trre13g01734 719 ProSiteProfiles DCD domain profile. 32 164 IPR013989 -
Trre13g01734 719 Coils Coil 375 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g01734 Trre-Chr13 14387582 14392511 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g01734 513 659 Miscellaneous Gene Families AT4G33900 26.380 2.13e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g01734 - - mtr:11405987 941.799
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g01734 13 14387582 14392511 Trre7g00352 7 2262314 2264729 PCT