Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g01716 ATGGATCAGATATTGAATAAGGTCGGATCTTACTGGTTCAGCAAGAAAGCCAACAAGGAACTTAACTCTGTCGGTGATGATATCAACTCACTGTCAAGCAGCATTGAAGGAGGAACCAAATGGCTGGTCAACAAATTAAAAGGAAAGATGCAAAAGCCATTAACAGAGTTACTGAAGGAGTATGATCTACCAATAGGAATCTTTCCACGTGATGCAACAAACTATGAATTCAACGAAGAAACAAGAAAGCTTGTTGTTTACATTCCTCAAGTGTGCGAAGTAGGGTACAGAGATTCATCAGTCTTGCGATTCACGACAAGTGTTTCTGGTTACTTGGAGAAAGGAAAGCTAGTAGACATAGAGGGTATAAAGACCAAAGTGTTGGTTTGGGTGAAAGTCACCGCCATTTCATCTGAGGGACCAAAGCTTCACTTCACTGCTGGTATGAAGAAAACAAGGAAAAGAGAAGCATATGAGGTTTCTAGAGATGGTGTAATTATAGATAAATTCTGA 513 0.3977 MDQILNKVGSYWFSKKANKELNSVGDDINSLSSSIEGGTKWLVNKLKGKMQKPLTELLKEYDLPIGIFPRDATNYEFNEETRKLVVYIPQVCEVGYRDSSVLRFTTSVSGYLEKGKLVDIEGIKTKVLVWVKVTAISSEGPKLHFTAGMKKTRKREAYEVSRDGVIIDKF 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g01716 170 PANTHER T31J12.3 PROTEIN-RELATED 46 162 IPR007493 -
Trre13g01716 170 Pfam Protein of unknown function, DUF538 55 159 IPR007493 -
Trre13g01716 170 Gene3D - 32 170 IPR036758 -
Trre13g01716 170 SUPERFAMILY At5g01610-like 2 169 IPR036758 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g01716 Trre-Chr13 14195895 14198831 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g01716 - - gmx:100305947 317.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g01716 13 14195895 14198831 Trre13g01716 13 14195895 14198831 ECH
Trre13g01716 13 14195895 14198831 Trre7g00366 7 2359514 2362690 PCT