Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g01715 ATGGCTCTTTCTTGTTCAAAAGTTTCATCCTTTAATGGATTTTCTCTCTCACCCATTTATGGAAATGGTTTCAAAAAGCTAAATTCATCATCTTTTTGTAATTTGAGAGTTGATAAGAAATGGGGTAGTGGAAAGTTCACGGTTTCTGCAGCAGCAACAACGGTTCCTTTGACTGGTGTTATATTTGAACCGTTTGAAGAGGTTAAGAAAGATTATCTTGCTGTTCCAATTGTTCCTCAAGTTTCTTTGGCCAGACAGAATTTTTCTGATGAATGTGAATCAGTTATTAATGAACAGATTAATGTGGAATACAATGTTTCCTATGTGTACCACTCCATGTTTGCATATTTTGATAGGGACAACGTGGCTCTCAAGGGATTTGCAAAGTTTTTCAAGGAATCTAGTGAAGAAGAGAGAGAACATGCTGAAAAGCTTATGAAATATCAGAACATTCGTGGTGGAAGAGTTGTACTTCACCCGATCAAGAATGTGCCGTCAGAATTTGAGCATGTCGAAAAAGGGGATGCATTGCATGCAATGGAATTAGCTTTGTCTTTGGAGAAGTTAACAAATGAGAAACTTCTGAATGTGCATAGTGTCGCAGACCGCAACAATGACCCTGAAATGACACACTTCATTGAAGGCGAATTTTTGGCTGAACAGGTTGAATCAATTAAGAAGATATCAGAGTATGTGTCTCAATTGAGAAGGGTTGGAAAGGGTCATGGTGTTTGGCACTTTGATCAAAGACTTCTTCATGAGGAACATGCTGCTTGA 777 0.3822 MALSCSKVSSFNGFSLSPIYGNGFKKLNSSSFCNLRVDKKWGSGKFTVSAAATTVPLTGVIFEPFEEVKKDYLAVPIVPQVSLARQNFSDECESVINEQINVEYNVSYVYHSMFAYFDRDNVALKGFAKFFKESSEEEREHAEKLMKYQNIRGGRVVLHPIKNVPSEFEHVEKGDALHAMELALSLEKLTNEKLLNVHSVADRNNDPEMTHFIEGEFLAEQVESIKKISEYVSQLRRVGKGHGVWHFDQRLLHEEHAA 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g01715 258 Gene3D - 55 256 IPR012347 -
Trre13g01715 258 Pfam Ferritin-like domain 96 238 IPR008331 GO:0008199
Trre13g01715 258 SUPERFAMILY Ferritin-like 80 253 IPR009078 -
Trre13g01715 258 PANTHER FERRITIN 65 253 IPR001519 GO:0006826|GO:0006879|GO:0008199
Trre13g01715 258 ProSitePatterns Ferritin iron-binding regions signature 2. 206 226 IPR014034 -
Trre13g01715 258 FunFam Ferritin 55 255 - -
Trre13g01715 258 CDD Euk_Ferritin 89 249 - -
Trre13g01715 258 ProSitePatterns Ferritin iron-binding regions signature 1. 137 155 IPR014034 -
Trre13g01715 258 ProSiteProfiles Ferritin-like diiron domain profile. 86 239 IPR009040 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g01715 Trre-Chr13 14191164 14193794 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g01715 K00522 - gmx:547824 365.925
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g01715 13 14191164 14193794 Trre13g01715 13 14191164 14193794 ECH
Trre13g01715 13 14191164 14193794 Trre7g00367 7 2370770 2373195 PCT