Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g00734 ATGTCGTCTTCTTCTTCGCCGGACATTGTGTCAATTTTGGAGAACTCGAAGGAACTCGATCGGTTAAGGAAAGATCAGGAAGATATTCTATCTGAGATCAACAAGCTTCACAAGAAGCTTCAAACCACTCCTGAAGTGGTTGAGAAGCCTGGAGATAACTCATTAGCAAAGCTGAAATCGTTGTATACTCAAGCAAAAGAACTTTCAGACACTGAAGCAAATCTTTCCACTATGTTGATAAGCCAACTTGATGCCCTGTTTCCTCCGGGACCGCAAGGACAACCACGAAGAAGATTAGCTAACAGTTCTTCTGTTCCAGAAGGCAATGAGCAGAAAAGGAAACGAGTGAAGACTGAGTCAGACATTTCAAGGTTAACTCCGAGTATGCGAAATCAACTTGAGGCTTGTGCCAGTCTTAAGGGTGAACAGGTAGCAGCTAGGGTCACGCCACGTAATGCAGATAAGGACGAATGGTTTGTTGTGAAAGTGATTCATTTTGATAAGGAATTAAAGGAATTTGAAGTACTTGATGAGGAACCTGGTGATGATGAAGATAGCAGTGGTCAAAGACAATACAAACTTCCCATGGGAAATATCATTCCTTTCCCCAAGAGTAATGATCCTTCAAGTGCCCAAGATTTCCCTCCTGGAAAACATGTTTTGGCAGTTTATCCAGGAACTACTGCCCTCTATAAAGCAACAGTTGTTCATGGCCCTCGCAGGAGGAAGACAGATGATTATGTGTTGGAGTTTGATGATGACGAAGAAGATGGATCGCTACCTCAAAGGACTGTGCCCTTCCACAAAGTGGTTCCTCTGCCAGAAGGACATCGTCAGTAA 840 0.4345 MSSSSSPDIVSILENSKELDRLRKDQEDILSEINKLHKKLQTTPEVVEKPGDNSLAKLKSLYTQAKELSDTEANLSTMLISQLDALFPPGPQGQPRRRLANSSSVPEGNEQKRKRVKTESDISRLTPSMRNQLEACASLKGEQVAARVTPRNADKDEWFVVKVIHFDKELKEFEVLDEEPGDDEDSSGQRQYKLPMGNIIPFPKSNDPSSAQDFPPGKHVLAVYPGTTALYKATVVHGPRRRKTDDYVLEFDDDEEDGSLPQRTVPFHKVVPLPEGHRQ 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g00734 279 Gene3D - 142 204 - -
Trre13g00734 279 PANTHER UNCHARACTERIZED 19 279 IPR037802 GO:0000124
Trre13g00734 279 FunFam SAGA-associated factor 29 isoform X6 142 205 - -
Trre13g00734 279 ProSiteProfiles SGF29 C-terminal domain profile. 134 279 IPR010750 -
Trre13g00734 279 Coils Coil 19 39 - -
Trre13g00734 279 MobiDBLite consensus disorder prediction 177 216 - -
Trre13g00734 279 CDD Tudor_SGF29_rpt1 140 206 IPR047288 -
Trre13g00734 279 MobiDBLite consensus disorder prediction 88 125 - -
Trre13g00734 279 FunFam SAGA-associated factor 29 isoform X6 206 279 - -
Trre13g00734 279 Gene3D - 205 279 - -
Trre13g00734 279 Pfam SGF29 tudor-like domain 140 274 IPR010750 -
Trre13g00734 279 CDD Tudor_SGF29_rpt2 214 273 IPR047287 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g00734 Trre-Chr13 5653754 5661323 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g00734 K11364 - gmx:100526864 475.322