Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g00694 ATGGACATCCTCTTTGCTCAGATCCAAGCTGACCTCCGTTCCAACGACGCCCTCCGTCAATCAGGCGCACTCCTCCAAGCTCTCCAACAATCCGCCGCCGGTCGTGACATCGCCGTCATCGCTAAATCCGCCGTTGAAGAGATCGTTGCCGCTCCAGCTTCCGCCGTCTGCAAAAAACTCGCATTCGATCTCATCCGTTCCACTCGCTTAACTCCCGATTTATGGGACACTGTCTGTACAGGTATCCGTAACGACTTCCATTTCCCTGATCCCGATGTAACTGCCGCTGCTGTTTCAATTCTCGCCGCGATTCCTTCTTATCGTTTAGCGAAACTCATTTCTGATTGTAATAAAGAGATCTCTGATTGTTTCGATTCACCTAGTGATAATCTTAGATTCTCCATTACTGAAACCCTAGGTTGTGTACTTGCACGTGATGATCTTGTTACACTTTGTGAAAACAATGTTAACCTTCTTGATCGCGTTTCCGCTTGGTGGGGACGCATTGGTGCTAATATGCTTGACCGATCTGATGCGGTTTCGAAGGTTGCTTTCGATTCGGTTGGAAGGCTTTTCCAGGAGTTTAGTACTAAGCGGATGAGTAAACTTGCTGGTGATAAGTTAGTTGATAGTGAAAATTCGCTTGCGATTCGGTCGAATTGGGTTTCATCTATGGTTGATTTCGTTTGGAAGAAGCGCAGGGCACTTATGGCTCGTTCGTTGATTTTGCCGGTTGAGAATTTCCGAGCTACTGTGTTTCCGGTTGTTTATTCGGTTAAGGCTGTTGCCTCTGGTGGTGTTGAGGTTATTCGGAAGCTGTCGAAGTCTTCTAGTGTAGGTGGTGGTGGTGCTGAGGCTGATTCTAACGCTGAGAAATTGGTTGGTGTTTCGGATGTGGTTACGCATTTGGCTCCTTTTTTGGTTTCTTCGTTGGAACCGGCGTTGATTTATGAGGTTGGGATTAATATGTTGTATTTGGCTGATGTGCCTGGAGGGAAAACAGAATGGGCATCACAATCTACTATTGCCATTCTTACATTGTGGGATAGGCAGGAGTTTGCTTCTGCTAGAGAGAGTATTGTTAGAGCTGTTGTTACCAATCTTCATCTCCTTGATCTTAACATGCAGGTTTCACTCTTCAAGAGGCTACTTTTGATGGTGAGAAACCTGAGAGCAGAATCTGATCGCATGCATGCTTTAGCTTGTATTTGTAGAACGGCTCTTTGTGTGGATCTGTTTGCTAAGGAAAGTGTCCGAAGAGGTCAGAAACCTCTTGCCGGAACTGATATTGCTTCCCTTTTTGAGGATGCAAGAGTGAATGATGATCTTAATAGCATTACAAGTAAAAACATATTTAGGGAAGAGTTAGTTGCATCACTAGTGGAAAGTTGCTTTCAGCTGTCTCTGCCTTTGCCTGAACAGAAAAACTCTGGTATGGAGAGCAGGGTCATTGGAGCTTTAGCATATGGAACTGGTTATGGTGCATTAAACTGGACCGAACCTTCTTTAGAAGTGGTGGAAGTTTGTCGGCCTTGTGTTAAATGGGATTGTGATGGTCGCACATATGCAATTGACTGCTACTTGAAGTTGCTTGTTCGGCTATGCTGCATATATGATACTAGAGGCGGTGTAAAAAGAGTCAAAGACGGTGCTTCTCAGGACCAAATTTTGAATGAGACTAGATTGCAAAACTTGCAACGTGAACTTGTGAGAGACTTACGCGAGGTCAATACACCAAGAATATTGGCCCGCCTTATATGGGCTATTGCAGAGCACATAGATATAGAAGGATTGGATCCACTCCTAGCAGATGACCCAGACGATCCTCTTAATGTCATTATATCAAATATTCATAAGGTTCTTTTCAATGTTGATTCAACTGCAGATACAACAAATAGAGTTCAAGATGTACAGGCAGTTCTTATATCTGCTCAAAGATTGGGATCACGCCACCCTAGAGCTGGACAGTTGCTTACTAAAGAGCTTGAAGAATTCAGGACCAATGCTTTGGCTGATTCTGTCAGCAAGCATCAGTGCCGTTTGATATTGCAAAGAATCAAATATGCTTCTGGTCATCCTGATAGTAGGTGGGCTGGTGTTACAGCAGCCAGAGGGGATTACCCATTTAGCCACCACAAGTTAACAGTTCAGTTTTATGAAGCATCTGCTGCTCAGGATAGAAAGTTGGAAGGATTGGTTCACAAAGCTATTTTAGAGCTATGGAGGCCTGACCCCAGTGAACTAACCCTTTTGCTTACCAAAGGAGTTGATGCTACTTCACTTAAGGTTCCTCCTACTGCAAATACTTTAACTGGCAGCAGTGATCCTTGCTATGTTGAAGGTTATCATTTAGCAGATTCAAGTGATGGGAGGATAACTCTGCATTTAAAGGTCTTAAATTTAACTGAGCTTGAATTAAATCGGGTGGATGTACGTGTTGGATTATCTGGTGCATTATATTATATGGATGGTTCTTCTCAAGCAGTGCGGCAGTTGCGAAATCTTGTTTCACAGGATCCAGTGCTGTGCAGTGTAACAGTTGGTGTTTCCCATTTTGAAAGGTGTGCCCTTTGGGTTCAAGTGTTGTATTACCCATTTTATGGTAGCGGGGCTGTTGGAGACTATGAAGGTGACTATGCTGAAGAGGATCCTCAAGTCATGAGACAAAAGAGAAGCTTAAGGCCCGAATTAGGTGAACCTGTGATTTTGAGATGTCAACCATATAAAATTCCATTGACTGAGCTACTTTTACCACATCAAATATCACCTGTCGAATTTTTCCGACTGTGGCCTAGTTTGCCAGCCATTGTTGAATACACTGGTACATATACATACGAAGGGAGTGGCTTTCAGGCTACTGCAGCCCAGCAGTATGGTGCATCTCCTTTCTTGAGTGGACTGAAATCCCTGTCTTCCAAGCCGTTCCACAAAGTTTGTTCACATATTATCCGCACAGTGGCAGGGTTTCAGTTGTGTTATGCTGCTAAAACTTGGCATGGTGGCTTCTTGGGGTTGATGATTTTTGGTGCAAGTGAAGTGAGTAGAAACGTGGATTTGGGTGACGAAACGACAACCATGATGTGCAAGTTTGTGGTACGTGCATCTGATGCATCTATTACTAAGGAGATTGGATCAGATCTTCAGGGTTGGTTGGATGACCTTACCGATGGTGGGGTGGAGTATATGCCTGAAGATGAAGTGAAATTAGCTGCAGCCGAGAGGCTTCGAATATCAATGGAAAGGATAGCCTTGTTGAAGGCAGCGCAACCACGACCCAAGACTCCAAAATCCGACTCCGAGGAAGATGAAGAAGAGGATACAGACAAAAAGGATGGGAATGAAGATGGCAAAAAGAAGGGACCTTCAACACTGTCCAAATTAACTGCCGAGGAAGCTGAGCATCAAGCTCTTCAGGCAGCAGTACTACAAGAGTGGCATATGCTCTGCAAGGATAGGAGCACTGAAGTTAAATAA 3474 0.4427 MDILFAQIQADLRSNDALRQSGALLQALQQSAAGRDIAVIAKSAVEEIVAAPASAVCKKLAFDLIRSTRLTPDLWDTVCTGIRNDFHFPDPDVTAAAVSILAAIPSYRLAKLISDCNKEISDCFDSPSDNLRFSITETLGCVLARDDLVTLCENNVNLLDRVSAWWGRIGANMLDRSDAVSKVAFDSVGRLFQEFSTKRMSKLAGDKLVDSENSLAIRSNWVSSMVDFVWKKRRALMARSLILPVENFRATVFPVVYSVKAVASGGVEVIRKLSKSSSVGGGGAEADSNAEKLVGVSDVVTHLAPFLVSSLEPALIYEVGINMLYLADVPGGKTEWASQSTIAILTLWDRQEFASARESIVRAVVTNLHLLDLNMQVSLFKRLLLMVRNLRAESDRMHALACICRTALCVDLFAKESVRRGQKPLAGTDIASLFEDARVNDDLNSITSKNIFREELVASLVESCFQLSLPLPEQKNSGMESRVIGALAYGTGYGALNWTEPSLEVVEVCRPCVKWDCDGRTYAIDCYLKLLVRLCCIYDTRGGVKRVKDGASQDQILNETRLQNLQRELVRDLREVNTPRILARLIWAIAEHIDIEGLDPLLADDPDDPLNVIISNIHKVLFNVDSTADTTNRVQDVQAVLISAQRLGSRHPRAGQLLTKELEEFRTNALADSVSKHQCRLILQRIKYASGHPDSRWAGVTAARGDYPFSHHKLTVQFYEASAAQDRKLEGLVHKAILELWRPDPSELTLLLTKGVDATSLKVPPTANTLTGSSDPCYVEGYHLADSSDGRITLHLKVLNLTELELNRVDVRVGLSGALYYMDGSSQAVRQLRNLVSQDPVLCSVTVGVSHFERCALWVQVLYYPFYGSGAVGDYEGDYAEEDPQVMRQKRSLRPELGEPVILRCQPYKIPLTELLLPHQISPVEFFRLWPSLPAIVEYTGTYTYEGSGFQATAAQQYGASPFLSGLKSLSSKPFHKVCSHIIRTVAGFQLCYAAKTWHGGFLGLMIFGASEVSRNVDLGDETTTMMCKFVVRASDASITKEIGSDLQGWLDDLTDGGVEYMPEDEVKLAAAERLRISMERIALLKAAQPRPKTPKSDSEEDEEEDTDKKDGNEDGKKKGPSTLSKLTAEEAEHQALQAAVLQEWHMLCKDRSTEVK 1157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g00694 1157 MobiDBLite consensus disorder prediction 1086 1131 - -
Trre13g00694 1157 SUPERFAMILY ARM repeat 4 670 IPR016024 -
Trre13g00694 1157 PANTHER TSET COMPLEX MEMBER TSTA 1 1156 IPR037501 GO:0006897
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g00694 Trre-Chr13 5367014 5375242 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g00694 1 838 EF-hand Containing Proteins AT3G01780 85.000 0.0 1446
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g00694 - - gmx:100781324 2068.12