Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g00682 ATGGGTGCTCCGATCATTGAAAGTTTGAGAAAGCACACAAAGGCATATCTGGACTGTCACCTGATGGTTACAAATCCTCTTGACTATGTTGAACCTTTGGGAAAAGCTGGTGCTTCCGGTTTTACATTTCATATAGAGACATCAAAAGACAACTGGGAAGAACTTATCCAAAATATTAAGTCACACGGCATGAAGCCTGGTGTAGCGATTAAGCCTGGTACATCAGTTGAAGAGGTTTATCCTCTGGTTGAATCTGAAAATCCTGTGGAAATGGTTCTTGTCATGACTGTAGAACCTGGATTTGGAGGACAAAAATTTATGCCAGAGATGATGGACAAGGTACGGACACTGAGGAAGAAGTATCCATCACTTGACATAGAGGTTGATGGTGGTTTAGGACCTTCAACCATAGACGAAGCTGCATCAGCAGGAGCGAATTGCATTGTTGCTGGAAGTTCGGTGTTTGGTGCCCCCGAGCCTGATCAATACATGTCACAACTACATAAACTGTAA 513 0.4308 MGAPIIESLRKHTKAYLDCHLMVTNPLDYVEPLGKAGASGFTFHIETSKDNWEELIQNIKSHGMKPGVAIKPGTSVEEVYPLVESENPVEMVLVMTVEPGFGGQKFMPEMMDKVRTLRKKYPSLDIEVDGGLGPSTIDEAASAGANCIVAGSSVFGAPEPDQYMSQLHKL 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g00682 170 CDD RPE 1 168 IPR000056 GO:0005975|GO:0016857
Trre13g00682 170 FunFam ribulose-phosphate 3-epimerase isoform X2 1 169 - -
Trre13g00682 170 ProSitePatterns Ribulose-phosphate 3-epimerase family signature 2. 92 114 IPR000056 GO:0005975|GO:0016857
Trre13g00682 170 SUPERFAMILY Ribulose-phoshate binding barrel 2 168 IPR011060 -
Trre13g00682 170 Pfam Ribulose-phosphate 3 epimerase family 1 155 IPR000056 GO:0005975|GO:0016857
Trre13g00682 170 Gene3D Aldolase class I 1 170 IPR013785 -
Trre13g00682 170 PANTHER RIBULOSE-5-PHOSPHATE-3-EPIMERASE 1 169 IPR000056 GO:0005975|GO:0016857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g00682 Trre-Chr13 5292993 5294793 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g00682 K01783 - gmx:100500085 307.375
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g00682 13 5292993 5294793 Trre13g00682 13 5292993 5294793 ECH