Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g00681 ATGGGTTCTTGTTCTTCTGTCCATAGAAACTCATTATGTTCTAAAACTGTTGATAAGCTTGTGATTCTTCCATCACCCATCAAAGACAAACCCAAAAATGAAAACTTTATGATCCATGATGTTGCTGTTAAGTCTCAGTTATCACCTTCTCAATCAACCACCACCTTCAATGTTAGCAAAGAGGAAGCATTTTTTGATTCCAAGGGCTGGTTAGACTCTGATTGTGAAGACGATTTCTATAGCGTCAATGGTGAGTTTACTCCATCTCGTGGCAACACTCCACTGCATCACAGTTTCGCGACCCCTCCCATCAACAAAACGCCTTCTGAGAATGCAGTTCCTGAACCATCTCCCAGGAAAAAGAATTTGTTAGAACTTTTTAAAGAAAGTGTCAGAGAGAACCAAAATGGTGAATTTGGAAAAACTTACAGCAATGAAGAGAAACAAGTTAAACCAATTACTATACACGATCTTACTAAATCTGCACAAAGTACTCCTTATATCTCAGGTGGAAACTCTGCATGTAGTAGTATCGAAAGAACTATGAAGGATGAAAACGAATCGGTTAAACCTGTGAATTGTTGCCTTCCAAGCTTGGCTTCATATCGTAGCTTTAGTGAGAGGAGGAGGAACACAAGTCTGGCTATAGCAGCTAATGGAAAAGTTTGA 669 0.3931 MGSCSSVHRNSLCSKTVDKLVILPSPIKDKPKNENFMIHDVAVKSQLSPSQSTTTFNVSKEEAFFDSKGWLDSDCEDDFYSVNGEFTPSRGNTPLHHSFATPPINKTPSENAVPEPSPRKKNLLELFKESVRENQNGEFGKTYSNEEKQVKPITIHDLTKSAQSTPYISGGNSACSSIERTMKDENESVKPVNCCLPSLASYRSFSERRRNTSLAIAANGKV 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g00681 222 PANTHER OS01G0920100 PROTEIN 1 213 IPR038947 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g00681 Trre-Chr13 5283945 5287429 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g00681 - - psat:127107154 320.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g00681 13 5283945 5287429 Trre13g00681 13 5283945 5287429 ECH
Trre13g00681 13 5283945 5287429 Trre3g03747 3 48353544 48356415 PCT