Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g00668 ATGGTTCTTCTAGGCTTAACGAAGTTCTCTGTTTTGTCACTCTGTTTCTTAGTCTTAGCAACTTTTCCTTATCAAGTTTCAAGTCATGGTTCCTTTGGAAGAAAACCTAATGGAGCTTACCCTCCTTTGGATGATGGAATATGTGCTACTTCTGTCATTGTTCATGGATATAAATGCCAAGAACTTCAGGTTACAACTAAAGATGGGTACATTCTAAGCCTGCAAAGGATCCCAGAAGGTAAAGGTGAAGGTAGTAACGGTGGGACTAGGAAACAACCAGTGATATTACAACATGGAGTATTAGTGGATGGTATGACATGGCTTATGAACTCTCCAGAACAAGACTTGCCTCTAATTCTAGCAGATAACGGTTATGATGTTTGGATTGCTAACACAAGAGGGACCAGACATAGTCGCCGACATGTCTCATTGTACCCCTCTAACAAGGCCTTTTGGAATTGGTCTTGGGACGAACTTGTTACATATGATCTACCTGCTGTGTTTGATTATGTGTACAGCCAAACAGGGCAGAAGATTAATTACGTTGGTCATTCTCTGGGGACTTTGATAGCTTTAGCTTCCTTCTCAGAAGGAAAATTGGTTAACCAGCTTAAATCAGCGGCCTTGTTGAGCCCCATTGCCTATCTGAGCCACATGAACACCGCACTCGGTGTTATTGCAGCCAAGTCCTTTATTGGCGAGATCACTACACTACTTGGTCTAGCTGAATTTAATCCCAAAAGTTTACCTGTTGAAGCCTTTCTCAAGCCTCTATGTGCTGACCCTGGAGTTGACTGCTTTGACTTGTTGACTGAATTAACTGGTAAAAATTGTTGTCTCAATTCTTCAACTGTTGATCGATTCTTAATGAATGAACCTCAATCAACATCAACAAAGAACATGGTGCACTTGGCTCAAATTGTTAGACATGGAGTTTTAGCAAAATTCAATTATATAAGACCAGATTATAACATTATGCACTATGGAGAAATATTTCCACCAATATATAACCTATCAAATATTCCACATGATCTACCACTCTTCATTAGCTATGGAGGACAAGATGCACTTTCTGATGTTCGTGATGTTGAGAATTTACTTGATAGACTTAAATTCCATGATGTGGATAAGAGAAGTATTCAATTTGTGAAAGATTATGCTCATGCTGATTATATTATGGGGTTTAATGCTAAGGACATAGTTTATAATTCTGTTCTTTCATTTTTCAATGGTCAAGTCAACACTTGA 1248 0.3878 MVLLGLTKFSVLSLCFLVLATFPYQVSSHGSFGRKPNGAYPPLDDGICATSVIVHGYKCQELQVTTKDGYILSLQRIPEGKGEGSNGGTRKQPVILQHGVLVDGMTWLMNSPEQDLPLILADNGYDVWIANTRGTRHSRRHVSLYPSNKAFWNWSWDELVTYDLPAVFDYVYSQTGQKINYVGHSLGTLIALASFSEGKLVNQLKSAALLSPIAYLSHMNTALGVIAAKSFIGEITTLLGLAEFNPKSLPVEAFLKPLCADPGVDCFDLLTELTGKNCCLNSSTVDRFLMNEPQSTSTKNMVHLAQIVRHGVLAKFNYIRPDYNIMHYGEIFPPIYNLSNIPHDLPLFISYGGQDALSDVRDVENLLDRLKFHDVDKRSIQFVKDYAHADYIMGFNAKDIVYNSVLSFFNGQVNT 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g00668 415 Gene3D alpha/beta hydrolase 46 411 IPR029058 -
Trre13g00668 415 Pfam Partial alpha/beta-hydrolase lipase region 53 110 IPR006693 GO:0006629
Trre13g00668 415 SUPERFAMILY alpha/beta-Hydrolases 55 410 IPR029058 -
Trre13g00668 415 FunFam Lipase 41 411 - -
Trre13g00668 415 PIRSF Steryl_ester_lip 6 414 IPR025483 GO:0016788
Trre13g00668 415 PANTHER LYSOSOMAL ACID LIPASE-RELATED 53 410 - -
Trre13g00668 415 Pfam alpha/beta hydrolase fold 113 360 IPR000073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g00668 Trre-Chr13 5224812 5229989 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g00668 45 415 Acyl Lipid Metabolism Gene Families AT2G15230 39.037 2.68e-94 287
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g00668 K01052 - gmx:100779460 689.108