Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g00667 ATGACTCTCCGGCTTATCACATCTCCGCCCTCCTTCCCTCGCTTCACCTGTCACGCCACCGCCCTTCCTCGCTCTCCTCAAATCTCCACACCAACCTCTATTTCTTTAACTCCACAGTCCCCGTCACTAACATGCGCACTTCACTGTTCCCATTTTCAATCGTGTTCGGGGTGTACGCATGAGCATAATCTCCATCGTCCTGTAATATTGGAAGATGCTATCAATTTCTTTCGGAAATATGGTGTTACTGACTTCACATTTGATTCTTGCAAATTGTGGGGTTGGAGATGTCGTGCGAAATTGGCAGTGCGTGGTTCTTCAACCAACCCTCTCATTGGCCTTTATGAGGAGGGAACTCATAATGTAATTGACATTCCAGAGTGCAAAGCTCATCATCCTAATATTAATGCTGCCGTAGAGCTTCTTAGACAAGGTATTACCGAATTAGATGTTGAACCATTTCTTGAAGATGAAGGCACTGGCAATTTGCGATATGTTCAGATGGCTGTGACAACACACAACACCTCTCTTCCTGCTGCACAAAGATATATGAGTGGTAAGGTTCAGGTTACATTGGTTTGGAATTCAAGAAACGAAAATTCCACTGGTTCAGAGAAACTGAATGCATTGGCAAATTTCCTGTGGAAAAAGGGTGGGCCACGGAGCAAGCTTCATTTGATACACTCTGTGTGGGCCAACTTTCAGACTTCTGAGAAAAATATAATATTTGGGAATAGATGGAGACATCTTCTTGGAGAAAGAGATTTTTGGGAACATGTTGGTGGAATTGATGTGTCATTGGCCCCTTCTAGTTTTGGCCAGGCAAATACGCGGGCTTTTGACGCCTTGTTGCAGAAGTTACAGAAATATGTTCCATATGAATCATCTGTTACTGATTTGTATGCTGGAGCTGGGGTCATCGGGTTATCATTAGCCGCCACAAGAAAATGCAGATCTATTAAATGCATTGAGATTAACAAAGAGTCAAAGGTATCTTTTGAGAAGACTATTGAACGTTTGCCAGACACCGTGGACAGCAGCATCACTTGGCATCACGCAGATGCTTCAAAAGATCCTTTTTCGTGGCTTATGGGCTCAGATGTTGTAGTCATTGATCCTCCTAGAAAAGGACTAGATTCATCTCTTATTGATGCATTGAAGAATATATCATCAGTGGCGCGTAAAGTTTTGTCATCATATGAACGCTCAAACAACGTGCAAGAAGAGAAAAGACCGTGGATTTTACGTGCTAATGAAGCTTCAGTCCATATCAAAAGCAAATCACCTGAGGGAAACATTCCTCCATTGGTGCCTCAAACCCTTATTTATATAAGCTGTGGATGGGAAAGTTTTAAAGAGGACTGCAAGTCATTGTTGTCAAATAATGCATGGTATTTGGAAAAAGCTCACGGTTTTAATTTCTTTCCTGGTACTCAAAGCATTGAAGTTCTGGCAGTGTTCAAGAGGGGCCCTCAGAAAAAGAAATCAGGAAAGAAAAAGAAAAAACACTTGCAAGGAGCTGCTAGACAAAAATGA 1536 0.4225 MTLRLITSPPSFPRFTCHATALPRSPQISTPTSISLTPQSPSLTCALHCSHFQSCSGCTHEHNLHRPVILEDAINFFRKYGVTDFTFDSCKLWGWRCRAKLAVRGSSTNPLIGLYEEGTHNVIDIPECKAHHPNINAAVELLRQGITELDVEPFLEDEGTGNLRYVQMAVTTHNTSLPAAQRYMSGKVQVTLVWNSRNENSTGSEKLNALANFLWKKGGPRSKLHLIHSVWANFQTSEKNIIFGNRWRHLLGERDFWEHVGGIDVSLAPSSFGQANTRAFDALLQKLQKYVPYESSVTDLYAGAGVIGLSLAATRKCRSIKCIEINKESKVSFEKTIERLPDTVDSSITWHHADASKDPFSWLMGSDVVVIDPPRKGLDSSLIDALKNISSVARKVLSSYERSNNVQEEKRPWILRANEASVHIKSKSPEGNIPPLVPQTLIYISCGWESFKEDCKSLLSNNAWYLEKAHGFNFFPGTQSIEVLAVFKRGPQKKKSGKKKKKHLQGAARQK 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g00667 511 Gene3D - 96 272 - -
Trre13g00667 511 CDD AdoMet_MTases 299 395 - -
Trre13g00667 511 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 47 489 IPR029063 -
Trre13g00667 511 Gene3D Vaccinia Virus protein VP39 427 487 IPR029063 -
Trre13g00667 511 Gene3D Vaccinia Virus protein VP39 273 426 IPR029063 -
Trre13g00667 511 MobiDBLite consensus disorder prediction 491 511 - -
Trre13g00667 511 PANTHER BNAA06G32370D PROTEIN 33 495 - -
Trre13g00667 511 Pfam Methyltransferase small domain 281 399 IPR007848 GO:0008168
Trre13g00667 511 ProSiteProfiles SAM-dependent methyltransferase RNA m(5)U-type domain profile. 53 490 IPR010280 GO:0006396|GO:0008173
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g00667 Trre-Chr13 5211701 5219001 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g00667 - - gmx:100816889 851.277