Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g00656 ATGGTTGCTTCTAAGTTGGCGGAGCAGAGATCGAAGGCTGAGCGCTTTAACAACCTTGATCTTTCGAAGGGTCCTGTTGAAACAAGGCCAAGGGATAAATTTGGGTTCCAAGAGGAGAACAAATTTGACACGCTTAACTTGAGCATGTTAAACTTGGAGTCTAAATTTACTGAGAGTATGAGCAAAAGCTCGCTTCGAAACGGTGTTTACAATATGAATGCTGTTTACCAGAAAAGCAATGCAAATTTGGTGGGTAACATGAACAGTAACAAGTATAGCGGTAATGTTCAGCTCAACAAAGATCCACACAGCAACAACAATAACAGCAACAACAACAACAATGAAAACAATACAAATGGTACTGACAAAAGGTTCAAGACCTTGCCTGCAGCAGAGACACTCCCACGCAATGAGGTGCTTGGAGGATATATCTTTGTCTGTAACAATGACACAATGCAGGAAGACTTAAAGCGTCAGCTATTTGGTTTGCCTCCAAGGTACCGAGATTCTGTCAGGGCAATAACACCAGGGTTACCTCTATTTCTGTATAACTATACCACCCATCAGCTACATGGCATTTTTGAGGCAGCAACTTTTGGGGGCTCTAACATAGATCCAACTGCATGGGAGGATAAAAAATGCAAAGGCGAGTCAAGGTTCCCAGCTCAGGTAAGAATCCGTGTCAGGAAAATTTGCAAGGCACTGGAAGAAGATTCATTCAGACCAGTATTGCATCATTATGATGGTCCAAAGTTTCGCCTTGAGCTGTCAGTTCCAGAGACCCTGGATCTAATGGACCTATGTGAGCAAGCTGGTTCTGCAGCCTAA 828 0.4324 MVASKLAEQRSKAERFNNLDLSKGPVETRPRDKFGFQEENKFDTLNLSMLNLESKFTESMSKSSLRNGVYNMNAVYQKSNANLVGNMNSNKYSGNVQLNKDPHSNNNNSNNNNNENNTNGTDKRFKTLPAAETLPRNEVLGGYIFVCNNDTMQEDLKRQLFGLPPRYRDSVRAITPGLPLFLYNYTTHQLHGIFEAATFGGSNIDPTAWEDKKCKGESRFPAQVRIRVRKICKALEEDSFRPVLHHYDGPKFRLELSVPETLDLMDLCEQAGSAA 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g00656 275 MobiDBLite consensus disorder prediction 86 123 - -
Trre13g00656 275 MobiDBLite consensus disorder prediction 1 26 - -
Trre13g00656 275 Pfam Development and cell death domain 141 267 IPR013989 -
Trre13g00656 275 ProSiteProfiles DCD domain profile. 138 270 IPR013989 -
Trre13g00656 275 PANTHER - 108 272 IPR044832 GO:0034976
Trre13g00656 275 SMART dcd 138 270 IPR013989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g00656 Trre-Chr13 5138023 5139747 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g00656 - - gmx:100789162 483.411
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g00656 13 5138023 5139747 Trre13g00656 13 5138023 5139747 ECH