Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g00654 ATGCCTGCTTTTCCCGAAGAACCACTTCTCGCTCCAAACCCTGACCGTTTCTGTATGTTCCCAATTCAATACCCTAAAATCTGGGAAATGTACAAAAAAGCCGAAGCTTCTTTCTGGACCGCAGAAGAAGTCGATCTCTCACAAGATCTTCCACACTGGCACAACCTAACCGACGGCGAACGTCACTTCATCTCACACGTTCTCGCCTTCTTCGCCGCCTCCGACGGTATCGTCTTGGAGAATCTTGCCGGAAGATTCATGAAAGAAGTTCAAGTCTCCGAGGCACGTGCTTTCTACGGTTTCCAGATCGCAATTGAAAATATTCATTCTGAAATGTATAGTCTCTTGATTGAGACTTACATCAATGATTCTATCGAGAAGAATCGTTTGTTTCACGCGATTGAAACGATTCCGTGTATTGCGAAGAAAGCTGATTGGGCTATGAAATGGATCGATTCATCTGATTCATTTGCTGAAAGAATCGTTGCTTTTGCTTGTGTTGAAGGTCTTCATTGTGATTTTGCTTGTTTACTATATTCACTTCTGAGAAAGAAACTTAGCGAGGAGCGTGTGAAAACAATTGTGCGTGATGCGGTTGAAATTGAGAGAGAATTTGTTTGTGAAGCGCTTCCTTGTGCTTTAGTTGGAATGAACGGTGATTTGATGAGTCAGTATATCGAGTTTGTTGCTGATAGGTTATTGGGTGAACTTGGTTGTGGAAAAATTTATAATGTTCAGAATCCTTTTGATTGGATGGAATTGATTTCGCTTCAGGGGAAAACCAACTTTTTTGAAAAGCGCGTTGGGGAATATCAGAAAGCTTCTGTTATGAATAGCTTAACTGCAAATGGTGGTGCTCATGTTTTCAAGTTGGATGAAGATTTTTAG 888 0.4133 MPAFPEEPLLAPNPDRFCMFPIQYPKIWEMYKKAEASFWTAEEVDLSQDLPHWHNLTDGERHFISHVLAFFAASDGIVLENLAGRFMKEVQVSEARAFYGFQIAIENIHSEMYSLLIETYINDSIEKNRLFHAIETIPCIAKKADWAMKWIDSSDSFAERIVAFACVEGLHCDFACLLYSLLRKKLSEERVKTIVRDAVEIEREFVCEALPCALVGMNGDLMSQYIEFVADRLLGELGCGKIYNVQNPFDWMELISLQGKTNFFEKRVGEYQKASVMNSLTANGGAHVFKLDEDF 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g00654 295 PANTHER RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SMALL CHAIN 7 171 IPR000358 GO:0009263
Trre13g00654 295 CDD RNRR2 17 257 IPR033909 GO:0009263
Trre13g00654 295 Gene3D Ribonucleotide Reductase, subunit A 170 273 IPR012348 GO:0016491
Trre13g00654 295 ProSitePatterns Ribonucleotide reductase small subunit signature. 105 121 IPR030475 -
Trre13g00654 295 Pfam Ribonucleotide reductase, small chain 16 170 IPR000358 GO:0009263
Trre13g00654 295 SUPERFAMILY Ferritin-like 5 273 IPR009078 -
Trre13g00654 295 Gene3D Ribonucleotide Reductase, subunit A 3 169 IPR012348 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g00654 Trre-Chr13 5121117 5122106 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g00654 K10808 - qsu:112005137 538.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g00654 13 5121117 5122106 Trre13g00654 13 5121117 5122106 ECH