Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g00589 ATGCATTACCAAACAGCATCATGGGGAACCTACATGACACCAACAAGAATGCTAATGGATGATCCATTAGAGAGAATAGAAAGACTAGCATCAGAAAATGCTGTGGTGATTTTCAGCATAAGCACATGTTGTATGTGTCATGCAATCAAGAGATTGTTTTGTGGAATGGGAGTTAATCCAGCTGTTCATGAACTTGATGAAGATCCAAGAGGAAAAGAACTTGAAAGAGCACTCATGAGACTTCTTGGTACTTCAAATGTTGTTCCTGTTGTTTTCATTGGTGGTAAACTTATTGGTACTATGGATAGAGTCATGGCTTGTCATATTAATGGTTCTCTTGTTCCTCTTCTCAAACAAGCCGGTGCTCTTTGGCTTTGA 378 0.3915 MHYQTASWGTYMTPTRMLMDDPLERIERLASENAVVIFSISTCCMCHAIKRLFCGMGVNPAVHELDEDPRGKELERALMRLLGTSNVVPVVFIGGKLIGTMDRVMACHINGSLVPLLKQAGALWL 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g00589 125 PANTHER GLUTAREDOXIN 24 125 IPR011905 -
Trre13g00589 125 ProSiteProfiles Glutaredoxin domain profile. 23 124 - -
Trre13g00589 125 Gene3D Glutaredoxin 18 124 - -
Trre13g00589 125 Pfam Glutaredoxin 35 98 IPR002109 -
Trre13g00589 125 FunFam Glutaredoxin family protein 23 124 - -
Trre13g00589 125 NCBIfam glutaredoxin-like family 26 125 IPR011905 -
Trre13g00589 125 SUPERFAMILY Thioredoxin-like 23 124 IPR036249 -
Trre13g00589 125 CDD GRX_GRXh_1_2_like 34 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g00589 Trre-Chr13 4582973 4583350 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g00589 1 125 Miscellaneous Gene Families AT3G02000 63.235 1.14e-53 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g00589 K03676 - jre:118347954 218.779
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g00589 13 4582973 4583350 Trre13g00589 13 4582973 4583350 ECH