Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g00471 ATGATGCATTTGAACAACAACAAGAGAACACCAATAACACATTTCCCCTTGTACGGAAACCAACGGAGGAGTTCTCCTCGTTACAACAACACACCGTCGAAGGTTGTTTCAATTCCGGTTCATTTCGTTGGATCAGAGAGAAACAGAGCCGATTCAGCGACGAAGATTCAGAAGTTTGCAAGAGGGTTTCTTGTGAGGAAGAGTTTGAAGAAGATGTTGAAGATGAAGGTGGAATTGGAGGAGATTGAGAAGAAGGTGAATAATGAAGAAACAGTGAAGATGATGAAGAAGGAGCAAAAGGAGAAGGTAAGGATTGGTGAAACTATCATGAATTTGCTTCTTAGGTTGGATTCTGTTAGTGTTTTTCATTGTTGTTATGCTCTTAGGGACTTGAGAAAGTTGCTTATCAAAAGAGCTATTGTTCTTCAAGAATTTGTTGATCAAATTCAAATGATTACAACTGAGGTTGAAGATGAAAATGGTGAGGGTAAGTGTGATGGGGTTGAAGATATTTGTTTGGAGAAGGAGGAAGTGGGGTGTGAAGAGGAGAATGAGGGTGGTAAAAAAATTGAAGCTTTGGTGAATGAGGTGAATTGTATGGAGAAGGAATATGGGGGGTGTGATGTGGAAATTGAGGGAGGTGAAAATATGGATTCTGTGGTGAATGAGGAGAAGGATGTGGATGGTGGTGAGGATAAATTTGTAAAAGAAGAAGAGAATTGTTTGATGGAGGAAAAGGAAAAAGAGGGTCAAGATGAGGATGAGGAGAAGATGGAGGTAGAAGAGAAGGAAGAGAGTGTGGGAACAAGTTTTGTGGACGAAGAAGGAATTGAGGTGGAACGTGTGGATGTAAAAGTAGAGGGGGGTAGAATTGGAATTGAATGTGAGGAGGTTGAGGAGGAGAATTGTTATAAGGAAGGAGATGATGGGAATAGGAAAATGTTGAAAAGGATGATGGAGGACAATGAGAAGATGATGGAGATGATGACACAATTGTTTGAGAGGAATGAAAAGCAAACATCACTTCTTACATCTCTCACACAAAGGGTGGAGCAACTTGAGAGAGCATTTACTTGTGATAAGTTGAGGAAGAAGAAGAAGATGAGGAATGTTGATGCAAAACATAGATACTATAATGGTTACATATGA 1149 0.3995 MMHLNNNKRTPITHFPLYGNQRRSSPRYNNTPSKVVSIPVHFVGSERNRADSATKIQKFARGFLVRKSLKKMLKMKVELEEIEKKVNNEETVKMMKKEQKEKVRIGETIMNLLLRLDSVSVFHCCYALRDLRKLLIKRAIVLQEFVDQIQMITTEVEDENGEGKCDGVEDICLEKEEVGCEEENEGGKKIEALVNEVNCMEKEYGGCDVEIEGGENMDSVVNEEKDVDGGEDKFVKEEENCLMEEKEKEGQDEDEEKMEVEEKEESVGTSFVDEEGIEVERVDVKVEGGRIGIECEEVEEENCYKEGDDGNRKMLKRMMEDNEKMMEMMTQLFERNEKQTSLLTSLTQRVEQLERAFTCDKLRKKKKMRNVDAKHRYYNGYI 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g00471 382 MobiDBLite consensus disorder prediction 244 269 - -
Trre13g00471 382 SUPERFAMILY BAG domain 74 156 IPR036533 GO:0051087
Trre13g00471 382 ProSiteProfiles IQ motif profile. 49 78 IPR000048 GO:0005515
Trre13g00471 382 Gene3D BAG domain 43 162 IPR036533 GO:0051087
Trre13g00471 382 SMART iq_5 48 70 IPR000048 GO:0005515
Trre13g00471 382 MobiDBLite consensus disorder prediction 1 31 - -
Trre13g00471 382 Pfam BAG domain 80 148 IPR003103 GO:0051087
Trre13g00471 382 Coils Coil 336 356 - -
Trre13g00471 382 ProSiteProfiles BAG domain profile. 78 150 IPR003103 GO:0051087
Trre13g00471 382 PANTHER BAG DOMAIN CONTAINING PROTEIN, EXPRESSED 25 370 IPR040400 -
Trre13g00471 382 Coils Coil 236 263 - -
Trre13g00471 382 Coils Coil 65 99 - -
Trre13g00471 382 Pfam IQ calmodulin-binding motif 51 70 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g00471 Trre-Chr13 3724346 3725494 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g00471 - - tpra:123891396 464.536
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g00471 13 3724346 3725494 Trre13g00471 13 3724346 3725494 ECH