Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g00470 ATGGCGCTAAGATTGAGTATGACTGTACTTTCTTCTTCATTTTGTTTTGTGCCTCCAATTCCAAATCATTGTTCCAGGAGGAAACCCACCTTCAGATTCAGAACCACCTTTGCTGCTGCTACTAATACAATTACAACAATGGCCCTCAGCGAACAAACCCCTTCAACTTCTAAAATCATTGATTCTCATCTTCATGTCTGGGCTTCCCCTCAAGAGGCTAGTAAATTTCCTTATTCTCCTGGACAAGAGCCCAATTTACCTGGACATGTAGATTTTCTACTCCAGTGTATGGAGGAAGCAGGAGTACATGGTGCACTCATTGTGCAGCCGATTAATCATAAATTTGATCATAGTTATGTCACAAGTGTTTTGAAGAAATATCCATCCAAATTTATTGGTTGTTGTCTTGCTAATCCAGCTGGTGATGGAGGCGGGCTTAAGCAGTTTGAACATCTTGTTCTCAAGGATGGATACCGTGCTGTTAGATTCAACCCTTATTTGTGGCCATCTGGTGAAAAGATGACAAATGAAATAGGGAAGGCAATTTTCAAAAGAGCTGGTGAACTCAATGTACCAGTTGGCTTCATGTGTATGAAGGGGCTTGATTTACACATTTCTGAAATTGAGCAATTATGCACCGAGTTTCCATTAACAGTTGTATTGCTTGATCACTTGGCCTTCGGCAAACCACCATTAAATGACGAGGAAGGTCTTGTATTTTCCAAGCTTTTAAATCTATCTAGATTCCCACAAGTATATGTGAAATTTAGTGCACTTTTCAGAGTATCAAGGACAAAGTTTCCTTATCTGGATTTGTCTCCTTCTTTGTCCCAAGTTATCTCTAGCTTTGGTGCTGACCATGTAATATGGGGCAGTGATTTTCCATTTGTTGTTCCTGAATGTGGATACAAAGGAGCCAAAGAAGCAGTGCAACTTATTGCCAATCAGATTTCTCTTCCTTCATCTGATTTAGAGTGGATCATGGGCAAGACTGCGGCACAACTGTTCGAAAGCCAATTGAGTTCTGCTAAACAAGATTTTCTTTGA 1047 0.4031 MALRLSMTVLSSSFCFVPPIPNHCSRRKPTFRFRTTFAAATNTITTMALSEQTPSTSKIIDSHLHVWASPQEASKFPYSPGQEPNLPGHVDFLLQCMEEAGVHGALIVQPINHKFDHSYVTSVLKKYPSKFIGCCLANPAGDGGGLKQFEHLVLKDGYRAVRFNPYLWPSGEKMTNEIGKAIFKRAGELNVPVGFMCMKGLDLHISEIEQLCTEFPLTVVLLDHLAFGKPPLNDEEGLVFSKLLNLSRFPQVYVKFSALFRVSRTKFPYLDLSPSLSQVISSFGADHVIWGSDFPFVVPECGYKGAKEAVQLIANQISLPSSDLEWIMGKTAAQLFESQLSSAKQDFL 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g00470 348 Gene3D - 48 342 - -
Trre13g00470 348 PANTHER 2-AMINO-3-CARBOXYLMUCONATE-6-SEMIALDEHYDE DECARBOXYLASE 56 340 IPR032465 GO:0016831
Trre13g00470 348 FunFam Catalytic/ hydrolase 48 338 - -
Trre13g00470 348 SUPERFAMILY Metallo-dependent hydrolases 58 336 IPR032466 -
Trre13g00470 348 Pfam Amidohydrolase 60 336 IPR006680 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g00470 Trre-Chr13 3716735 3720175 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g00470 - - pvu:PHAVU_008G016700g 508.834
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g00470 13 3716735 3720175 Trre13g00470 13 3716735 3720175 ECH