Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g00468 ATGGCGACTCCTTATTCAACTCATTGTCGTTCATTTCCATCTTCTTCTATGTCTTCCAATCAATCTGTTATTTTCTCTAATCGATTTCTTGTCAACACTGTTTCTTTTAAATCTCAAACCCATTTCTTACAACAGATTTCAGTTCATACCCAACAACAAGATGGTGCAGTTGCATCTAGTGTAACCCCTGTTGAAAGCAACAATATTGGCAAGCGATTAAAACCTGAATTATTGTCGGTTACATCCTCCACGGAGACTCAAGATGAAGCTAGTATTGAAAACGATGTAAATGAGAACACTGTTAGTATAACAGTTGTTGGAGCCTCTGGAGACCTTGCCAAGAAGAAGATATTTCCGGCACTCTTTGCACTTTACTATGAGGGTTGTCTTCCTGAGCATTTCACCATTTGTGGTTATGCTCGAAGTAAGATGATTGATGCCGAACTGAGAAATATGGTTAGCAAGACTCTCACCTGCAGAATTGATAAGAGAGAGAACTGCAGTGAAAAAATGGATCAATTTCTTAAAAGATGTTTCTATCATTCTGGTCAATATGATTCTCCAGAAAACTTTGCAGCACTAGACAAGAAGCTGAAGGAACATGAGGATGGAAGAACTTCTAATCGCCTATTTTATCTTTCAATTCCTCCTAATATATTCATAGATGCTGTAAAATGCGCAAGCTTGTCAGCGTCGTCTGGTAACGGTGGTTGGACTAGGGTCATTGTTGAAAAGCCTTTTGGCCGTGATTCAGAATCCTCAGCCGCTTTAACAAGATCGTTCAAGCAGTATCTAACCGAGGATCAAATTTTCAGGATTGATCACTATCTTGGAAAAGAGCTTGTGGAAAATCTTTCTGTTCTCCGATTCTCAAATCTCATTTTTGAACCATTATGGTCGAGACAATACATAAGAAACGTACAGTTGATATTCTCAGAAGATTTTGGCACCGAAGGACGTGGCGGGTACTTTGACAATTATGGTATAATTAGAGATATTATGCAGAATCATCTACTTCAAATACTAGCCCTCTTTGCAATGGAAACACCTGTTAGTTTGGATGCTGAGGACATTAGAAATGAAAAGGTCAAGGTTCTTCGATCAATGAGACCGATTAAACTTGAGGATGTAGTGTTAGGCCAATATAAGAACCACACAAGAGGAGGTGTTGCATATCCAGCCTACGTTGATGATAAAACTGTACCAAAGGACAGCTTAACCCCAACATTTGCTGCGGCTGCCCTCTTCATAGATAATGCAAGATGGGACGGGGTACCTTTCCTGATGAAGGCTGGGAAAGCGTTACACAACAAAAGGGCTGAGATACGGGTACAGTTCAGGCACGTGCCGGGCAACCTGTACAATCGGAATCGGAATTTTGGGGTAGATCTTGATCGGGCAACAAATGAACTTGTCATAAGAGTTCAGCCTGATGAAGCTATTTATTTGAAAATCAACAACAAAGTACCGGGACTAGGAATGAAGTTGGACCGCAGTAATTTGAATCTCCACTATGCAGCAAGATACTCAAAGGAGATACCAGATGCATACGAAAGGCTACTTCTTGATGCAATTGAAGGAGAAAGAAGACTATTTATACGCAGTGATGAACTCGACGCTGCTTGGTCACTCTTTACGCCTGTGCTGAACGAGATAGAAGAGAAAAAGATAACTCCGGAGTACTATCCTTATGGTAGCCGTGGTCCTGTATGCGCTCACTATCTTGCAGCCAGATACAACGTACGATGGGGGGACCTCGGATTAGATGTAGAACAATAA 1779 0.4109 MATPYSTHCRSFPSSSMSSNQSVIFSNRFLVNTVSFKSQTHFLQQISVHTQQQDGAVASSVTPVESNNIGKRLKPELLSVTSSTETQDEASIENDVNENTVSITVVGASGDLAKKKIFPALFALYYEGCLPEHFTICGYARSKMIDAELRNMVSKTLTCRIDKRENCSEKMDQFLKRCFYHSGQYDSPENFAALDKKLKEHEDGRTSNRLFYLSIPPNIFIDAVKCASLSASSGNGGWTRVIVEKPFGRDSESSAALTRSFKQYLTEDQIFRIDHYLGKELVENLSVLRFSNLIFEPLWSRQYIRNVQLIFSEDFGTEGRGGYFDNYGIIRDIMQNHLLQILALFAMETPVSLDAEDIRNEKVKVLRSMRPIKLEDVVLGQYKNHTRGGVAYPAYVDDKTVPKDSLTPTFAAAALFIDNARWDGVPFLMKAGKALHNKRAEIRVQFRHVPGNLYNRNRNFGVDLDRATNELVIRVQPDEAIYLKINNKVPGLGMKLDRSNLNLHYAARYSKEIPDAYERLLLDAIEGERRLFIRSDELDAAWSLFTPVLNEIEEKKITPEYYPYGSRGPVCAHYLAARYNVRWGDLGLDVEQ 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g00468 592 PRINTS Glucose-6-phosphate dehydrogenase signature 264 292 IPR001282 GO:0006006|GO:0016614|GO:0050661
Trre13g00468 592 PRINTS Glucose-6-phosphate dehydrogenase signature 316 333 IPR001282 GO:0006006|GO:0016614|GO:0050661
Trre13g00468 592 PRINTS Glucose-6-phosphate dehydrogenase signature 334 350 IPR001282 GO:0006006|GO:0016614|GO:0050661
Trre13g00468 592 PRINTS Glucose-6-phosphate dehydrogenase signature 421 447 IPR001282 GO:0006006|GO:0016614|GO:0050661
Trre13g00468 592 PRINTS Glucose-6-phosphate dehydrogenase signature 240 253 IPR001282 GO:0006006|GO:0016614|GO:0050661
Trre13g00468 592 Pfam Glucose-6-phosphate dehydrogenase, NAD binding domain 105 284 IPR022674 GO:0006006|GO:0016614|GO:0050661
Trre13g00468 592 ProSitePatterns Glucose-6-phosphate dehydrogenase active site. 274 280 IPR019796 GO:0004345|GO:0006006
Trre13g00468 592 Gene3D - 96 272 - -
Trre13g00468 592 PANTHER GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE G6PD 87 583 IPR001282 GO:0006006|GO:0016614|GO:0050661
Trre13g00468 592 Gene3D Dihydrodipicolinate Reductase; domain 2 273 584 - -
Trre13g00468 592 FunFam Glucose-6-phosphate 1-dehydrogenase 273 584 - -
Trre13g00468 592 Hamap Glucose-6-phosphate 1-dehydrogenase [zwf]. 100 585 IPR001282 GO:0006006|GO:0016614|GO:0050661
Trre13g00468 592 FunFam Glucose-6-phosphate 1-dehydrogenase 97 272 - -
Trre13g00468 592 NCBIfam glucose-6-phosphate dehydrogenase 101 584 IPR001282 GO:0006006|GO:0016614|GO:0050661
Trre13g00468 592 Pfam Glucose-6-phosphate dehydrogenase, C-terminal domain 287 583 IPR022675 GO:0004345|GO:0006006|GO:0050661
Trre13g00468 592 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 274 583 - -
Trre13g00468 592 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 97 287 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g00468 Trre-Chr13 3685068 3689669 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g00468 K00036 - gmx:100793694 1003.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g00468 13 3685068 3689669 Trre13g00468 13 3685068 3689669 ECH