Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g00218 ATGTTCAATTCAATTCTTCTTCTCATTGTTATCATCTCTACATTGATGTGTAGCTTTGTGAATTCAATGCGGTTTGACCTTAACTCGGGTGAACCTAAGTGTATTACCGAGGAAATTAAGGGTAATGCCTTGACCGTCGGTAATTACTCCGTCGTTAATCCGATTGAAGGTTATCCACTTCCTGATTCTTACAAGATAACTGTTAGGGTTAGTTCACCTTATGGGAAACATTACCATTTTGGTGATCATGTGGCTTCTGGTAATTTTGCATTTAATACAGTTGAAGCTGGTGACCACACAGCTTATTTTTCGATGCTGGAACACACTCCCTCGATAACTGTTACCATTGATTTCGAGTGGAGAACTGGGGTGGCTGCCAAGGACTGGTATAAGATTGCAAAAAAAGATGACATTGATGTAATGGAATCTGAATTACACAGGTTGTATGACACTGCCACATTCATCCACGACGAGATGTTTTATCTTCGTGGAAGGGAGGAAGAGATGCAAGATCTTAACAGAGGGACTGATAATAAGATGTTTACTTTCATTTTTCTTTCAATCATAGTTTGCTTGTCTGTTTCTGGTTTACAAATATGGCATTTGAAGACATTCTTTGAGAGTAAGAAGCTCCTCTAA 639 0.3881 MFNSILLLIVIISTLMCSFVNSMRFDLNSGEPKCITEEIKGNALTVGNYSVVNPIEGYPLPDSYKITVRVSSPYGKHYHFGDHVASGNFAFNTVEAGDHTAYFSMLEHTPSITVTIDFEWRTGVAAKDWYKIAKKDDIDVMESELHRLYDTATFIHDEMFYLRGREEEMQDLNRGTDNKMFTFIFLSIIVCLSVSGLQIWHLKTFFESKKLL 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g00218 212 PANTHER TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN 5 209 IPR015720 -
Trre13g00218 212 ProSiteProfiles GOLD domain profile. 32 122 IPR009038 -
Trre13g00218 212 SMART EMP24_GP25L_2 22 207 IPR009038 -
Trre13g00218 212 Pfam emp24/gp25L/p24 family/GOLD 23 207 IPR009038 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g00218 Trre-Chr13 1772642 1774470 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g00218 K20352 - vvi:100257605 293.893
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g00218 13 1772642 1774470 Trre13g00218 13 1772642 1774470 ECH