Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g00168 ATGGGTTATGTGAAAGGTTTTTTTCACATAAAGATTGAATTTTTCGGTGTTTACTTTTGGGTTTTTCTTTGTAATGTTATGCAAACTCTGTTTTGGTTTTTCAACAAAGTCTGCATAAGATTCTATAGTTCTAAAGATATGAACACAATTTCTGGTTCTGAATTTTCCTTAGAAAATCATCAAATTGAGTCACAAACTGAGCCTAGCGAGGAAGAATTTTATGAATGTTTTGATGATACCAATGTGGAGTATGAAATTTATGATACTTCCTCACATGAAAGTGATCAAATTGAGTCTAGTTGTAGCCAAGAAAAAGGTGAAAAATTAGTAGAGTTTTGTTCTGAAAATTTTGATCATAGTGGAAATTTTGACCTAGAAGGAGAGGAAAAAACAAAGTTGGTTTTCAAATTTCAATATCAAAATTGGAATTGCAACTTAAGTGAGGAATTGAAGGAAAATCTTAGTGAAAGTAGTGATTTTGACAAAAGGGGCGTGGTTTCTTCGAGTGCCAACAAGTATGAGTTCATCTCAGGAAAGAGTTTTAGCCAATTTTTGGATAAACCTGAGGCTGCAAATTTTACTGTCAAAGAGTTCTTCATTCATTCATATGATAATGTTATCGATGATGATTCGGCTGGTTTGTTTTATGAGAGTAAATTGAAGCAAGAAAATTGTGAAGAGGTTGTTAATGAGAAAATTGTTGACAATTTCTCAGAAAATTTGCATGTTGAAGAGGTTTCGGAGAAGCTCAAGAATTCAGAAACATATGCGCGAAATTTTCTTTTGGATGATGATTTCATTTGTTCAAGTTCTGATACAGATTCTATTAGTTCTTTAGATGATGGTTTTTTGTCAGATACTGATTTTGGAACAACTACTGAGCATGATACATTAGGTAACAATGAAGAAAATGTAGAAGATTTGGACTTTATGGATGACAAGACCTTAGAAAGTCTGGATTTTGGTTATGAGCCGGATGATTTTGCCGGAGAAGATGAAGATATAATGAATGAGCTTGGAAAATTGGAAGAAGAAATCAAACATGAACAATCTGTGAAACAACAAAATTCAAAGAGTTTAACAGCTTTTGATCTCGAGGAATCAAACCGGTTCGATACACTTTGGGAGCATCAAGATTTGTTAGAACAGCTTAAGATGGAATTGAAGAAGGTTAGAGCTACTGGTTTACCTACAATCTTTGAAGATTCTGAGTCACCAAGGATCATGGAAGATTTGAAACCATGGAGAATTGATGAAAAATTTCAGCATGGTAGTAGTATTACAAATGAGCTTCCAAAATTCTACAGAAGTTACAGAGAAAGAATGAGGAAATTTGATATCTTGAATTACCAAAAGATGTATGCTTTAGGTGTTATGAAGTCAAAGGACCCACTAAAATCATTTTCAATTCACAAGAAAAATTCATCATCAATCACATGCATTCTTCCACGTGGCATTAACTTCTTGAGACGTAAAAACATTGATGATGCTGACCCAATGGAGAAGTTCATAAGAGAATTATACAGTGACTTGGAAATGGTTTATGTGGGACATTTGTGCCTTTCTTGGGAATTCCTTCGTTGGGAATATGAAAAAGCATTGAAGATATGGGAATCTGACCAATATGGACTCAGAAGGTTCAATGAAGTAGCTGGAGAATTTCAACAATTCCAAGTTCTTCTTCAAAGGTTTATAGAGAATGAACCTTTTCAAGGTCCAAGGGTTGAAAATTATGCTAGGAATCGTTGTGCCATGAGGAATCTTCTTCAAGTTCCTGTCATAAAAGAAGACAAAGGCAAGGATAGAAAGAAGTATAGAAAAAGAGAAATTGACAATGATGCCATCACAAGTGACATGTTAGTAGAAATTTTAGAAGAATCAATAAGAACAATTTGGCGTTTTATAAGAGGTGATAAAGATGCATCAAACTTGAAAATTAAATGTCTTAAAGAACATCATGTGCAGCTACAAGACCCTGCTGATTCACAGCTTTTAGTAGAGATTCGAATGGATCTTCAAAAGAAAGAAAAGAAATTAAGAGACATTTTGAAGTGTGGAAACTGCATATTGAAGAAATTCCAAAAGCATAATGAAGATGGAACAGATCCAGTTCTTTACTTTTTCTCTCAAGTAGATATGAAATTGGTTTGGAGAGTATTGAATATGTCAAGGATAACGACGGATCAACTAGCATGGTGTCGTAGTAAACTAAATAAGATCAATTTTGTAAACCGTAGGATTCATGTAGAACCATCATTCTTACTTTTTCCTAGTTAA 2277 0.3373 MGYVKGFFHIKIEFFGVYFWVFLCNVMQTLFWFFNKVCIRFYSSKDMNTISGSEFSLENHQIESQTEPSEEEFYECFDDTNVEYEIYDTSSHESDQIESSCSQEKGEKLVEFCSENFDHSGNFDLEGEEKTKLVFKFQYQNWNCNLSEELKENLSESSDFDKRGVVSSSANKYEFISGKSFSQFLDKPEAANFTVKEFFIHSYDNVIDDDSAGLFYESKLKQENCEEVVNEKIVDNFSENLHVEEVSEKLKNSETYARNFLLDDDFICSSSDTDSISSLDDGFLSDTDFGTTTEHDTLGNNEENVEDLDFMDDKTLESLDFGYEPDDFAGEDEDIMNELGKLEEEIKHEQSVKQQNSKSLTAFDLEESNRFDTLWEHQDLLEQLKMELKKVRATGLPTIFEDSESPRIMEDLKPWRIDEKFQHGSSITNELPKFYRSYRERMRKFDILNYQKMYALGVMKSKDPLKSFSIHKKNSSSITCILPRGINFLRRKNIDDADPMEKFIRELYSDLEMVYVGHLCLSWEFLRWEYEKALKIWESDQYGLRRFNEVAGEFQQFQVLLQRFIENEPFQGPRVENYARNRCAMRNLLQVPVIKEDKGKDRKKYRKREIDNDAITSDMLVEILEESIRTIWRFIRGDKDASNLKIKCLKEHHVQLQDPADSQLLVEIRMDLQKKEKKLRDILKCGNCILKKFQKHNEDGTDPVLYFFSQVDMKLVWRVLNMSRITTDQLAWCRSKLNKINFVNRRIHVEPSFLLFPS 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g00168 758 Coils Coil 374 394 - -
Trre13g00168 758 PANTHER OS09G0413600 PROTEIN 6 758 - -
Trre13g00168 758 Pfam Protein of unknown function (DUF1666) 509 757 IPR012870 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g00168 Trre-Chr13 1344072 1348998 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g00168 - - gmx:100785051 939.873
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g00168 13 1344072 1348998 Trre13g00168 13 1344072 1348998 ECH