Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g00151 ATGGCAAGAGTTGATCAAATAAACTGCTTTGTTATTTCTTTGTTCCTATTATTATGCTCGCTAACAATTTCAGAAGGCTTTCATTACGGATGGTCTCAGCTCAAGCCTAGCATAAAATCAACAGCACAAAATTGGTTAAACCATGGTGGAGACATATACAACAGAAGATATGCTAGCAATGAGCACAAAATCAACCTTAAAACAATTAAAAACTTGAGTTTGAAGTGGAAATTCAATGCAGGCAAAGACATAACTTCAACACCATCAATTTTCAATGGAACAATTTATTTTCCATCATGGAATGGATACATATTTGCAGTGAAAGAATTTGATGGATCACTTGTTTGGAAAAAGAATTTGACAAAATTAACAGGCCTAAAGGCAACAGGTTTTGTAGCAAATGCTAATTGGACTGTGGCTAGAGCAACACCAACAATAGCTTATGATGAAGATCTTGTGATTGTGGGAATATATGGGCCAGCTGTAGTTGTTGCTTTAAATAGATCAAATGGTGAATTAATTTGGCAGACTCGATTGGATGGCAATGATGCCGGCGTTGTTACCATGTCCGGTACTTATTATCGAGGGGCTTATTATGTTGGTTCATCATCACTAGAAGAACTCAAAAGTGAGGAAGAATGTTGCACATTTAGGGGAAGTTTTTCAAAGCTAGATATTAAATCTGGTGCTATTTTATGGCAAACTTTCATGCTACCTGATAACAAAGGAAAAAGAGGAGAATATGCCGGTGGAGCGTTATGGGGAAGTAGTCCGTCAATTGATTCATCGAGAAATCATATATACATTGCGACCGGAAATTTGTACTCTGCGCCTTTACGAATAAGACAATGTCAGGAGAAACAAAATAATTTAACAATACCAAGTCATCTTGATGAATGTATTGAAGAAGAAAATCATTCTAATTCAATCTTAGCACTTGATTTAGACAATGGTGAAATTAAATGGTTTCATCAATTTGGTGGATATGATGTTTGGTTTCTTGCTTGTAATAATTTGTCAGTGGCTAATTGTCCACCTGGACCTAACCCAGATGCTGATTTTGGAGAAGCACCAATGATGCTCACAATTAATGATGTTAATGGTACTAAACAAGATGTTGTTGTTGCTGTACAAAAAAGTGGTTTTGCTTGGTCTTTGCAACGTGACTATGGCAATCTCATTTGGTCTACGGAAGCTGGACCTGGTGGAGTTGCAGGAGGTGGAACATGGGGAGCAGCAACAGACACAAAAAGAGTGTATACAAATATTGTTAATTCAAATGGGAAAAACTTTACTCTTAAACCCTCCAACAAGATAACAAAAACTGGAGGTTGGGTAGCATTGGAAGCAAAAAGTGGCAAAATCTTGTGGTCCTTAGAAAATCCTAGTAATGCAACTGCTAATGGGCCTGTTAGTGTTGCTAATGGGATTGTCTTTGCAGGATCCACAAATGTGAATGGAACTATCTATGCAATTAATGGTAAAAATGGTGAAATTCTTTGGTCTTATCAAACTGGATCAACTATTTATGGTGGAATTTCAATAAGCAATGGTTGCATATATTTTGGAAATGGTTATACTTTTGGTATTGCAACGGCTATTGGAGGCTTCACGGGTGGTACTTCTCTTTATGCCTTTTGTGTCTAA 1647 0.3698 MARVDQINCFVISLFLLLCSLTISEGFHYGWSQLKPSIKSTAQNWLNHGGDIYNRRYASNEHKINLKTIKNLSLKWKFNAGKDITSTPSIFNGTIYFPSWNGYIFAVKEFDGSLVWKKNLTKLTGLKATGFVANANWTVARATPTIAYDEDLVIVGIYGPAVVVALNRSNGELIWQTRLDGNDAGVVTMSGTYYRGAYYVGSSSLEELKSEEECCTFRGSFSKLDIKSGAILWQTFMLPDNKGKRGEYAGGALWGSSPSIDSSRNHIYIATGNLYSAPLRIRQCQEKQNNLTIPSHLDECIEEENHSNSILALDLDNGEIKWFHQFGGYDVWFLACNNLSVANCPPGPNPDADFGEAPMMLTINDVNGTKQDVVVAVQKSGFAWSLQRDYGNLIWSTEAGPGGVAGGGTWGAATDTKRVYTNIVNSNGKNFTLKPSNKITKTGGWVALEAKSGKILWSLENPSNATANGPVSVANGIVFAGSTNVNGTIYAINGKNGEILWSYQTGSTIYGGISISNGCIYFGNGYTFGIATAIGGFTGGTSLYAFCV 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g00151 548 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 40 511 IPR011047 -
Trre13g00151 548 PANTHER QUINOPROTEIN ALCOHOL DEHYDROGENASE (CYTOCHROME C) 18 548 - -
Trre13g00151 548 Pfam PQQ-like domain 76 322 IPR002372 -
Trre13g00151 548 Pfam PQQ-like domain 391 506 IPR002372 -
Trre13g00151 548 Gene3D - 34 516 - -
Trre13g00151 548 SMART ire1_9 185 236 IPR018391 -
Trre13g00151 548 SMART ire1_9 144 178 IPR018391 -
Trre13g00151 548 SMART ire1_9 258 325 IPR018391 -
Trre13g00151 548 SMART ire1_9 88 119 IPR018391 -
Trre13g00151 548 SMART ire1_9 470 504 IPR018391 -
Trre13g00151 548 SMART ire1_9 432 460 IPR018391 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g00151 Trre-Chr13 1160152 1163507 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g00151 - - gmx:100791552 827.009
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g00151 13 1160152 1163507 Trre13g00151 13 1160152 1163507 ECH