Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g00129 ATGGGCGGAATTCTCTCTTCCTTGTTAGGTGGTGGCGGCGGCACCTCCGCCGATTCACAACAGTCTGAATCGGCCGAAAATTCTGCCGTTAAGACATTCCACTCATCAGCACGTTGGCAACTCCACTTCAACGAACTCAAAGATTCTCCTCGACTCGTTGTGATTGATTTCTCTGCTTCTTGGTGTGGACCTTGTAAGATGATGGAACCAATTATTCACGCCATGGCTAATGATTTCACTGATGTTGAATTCATCAAGATCGACGTTGACGAATTATCTGATGTGGCGCAGGAGTTTAAGGTGCAGGCTATGCCAACGTTTGTGTTGTTGAAGAAAGGGAAAGAGGTTGATAAAGTTGTTGGAGCAAAGAAAGATGAACTTCAAAACAAGATTAAAAAGCACAGAGCTTAA 411 0.4428 MGGILSSLLGGGGGTSADSQQSESAENSAVKTFHSSARWQLHFNELKDSPRLVVIDFSASWCGPCKMMEPIIHAMANDFTDVEFIKIDVDELSDVAQEFKVQAMPTFVLLKKGKEVDKVVGAKKDELQNKIKKHRA 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g00129 136 SUPERFAMILY Thioredoxin-like 24 134 IPR036249 -
Trre13g00129 136 CDD TRX_family 42 132 - -
Trre13g00129 136 PRINTS Thioredoxin family signature 100 111 - -
Trre13g00129 136 PRINTS Thioredoxin family signature 53 61 - -
Trre13g00129 136 PRINTS Thioredoxin family signature 61 70 - -
Trre13g00129 136 MobiDBLite consensus disorder prediction 9 29 - -
Trre13g00129 136 MobiDBLite consensus disorder prediction 12 29 - -
Trre13g00129 136 PANTHER THIOREDOXIN 30 133 - -
Trre13g00129 136 ProSitePatterns Thioredoxin family active site. 54 72 IPR017937 -
Trre13g00129 136 FunFam Thioredoxin 29 136 - -
Trre13g00129 136 ProSiteProfiles Thioredoxin domain profile. 19 136 IPR013766 -
Trre13g00129 136 Pfam Thioredoxin 43 133 IPR013766 -
Trre13g00129 136 Gene3D Glutaredoxin 13 136 - -
Trre13g00129 136 NCBIfam thioredoxin 45 134 IPR005746 GO:0015035
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g00129 Trre-Chr13 1024064 1024639 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g00129 K03671 - twl:119997174 190.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g00129 13 1024064 1024639 Trre13g00129 13 1024064 1024639 ECH