Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g00017 ATGGCAATCAGTCACAACACTTTGGCTTTTGCCTTTGGCATGATGGGTAACGTCATTTCGTTCTTGGTATTCTTGGCTCCAATATCAACATTTTATCGAGTATACAAGAAGAAATCGACAGAGGGTTTTCAGTCACTACCTTACCTAGTGGCTTTATTCAGCTCCATGCTTTGGTTGTACTATGCTTATCTTAAAAAAGACGCATTTCTCCTCATTACCATCAACTCATTTGGATGTGTGGTAGAGACCATCTATATCATATTGTACATCATTTATGCGCCAAGGGACGCAAGGAACTTAACTTTCAAGTTACTTTCGGCAATGAATGTGGGATCCTTTGCTTTGATCCTCTTAGTCACAAACTACGCCGTGCATGGTCCACTACTTCGTGTCCAAGTTCTTGGATGGATTTGTGTTTCCCTATCAGTTAGTGTCTTTGCGGCACCACTAAGCATTGTGGCACAAGTTGTTCGTACAAAGAGTGTTGAGTTTATGCCTTTCAATTTGTCATTCACTCTCACATTGAGTGCCACAATGTGGTTTGGTTATGGTCTCTTCCTCAAGGACATATGCATTGCTCTTCCAAATGTGTTGGGTTTTGGACTGGGATTACTTCAGATAGTGGTGTATGCAATTTATAGGAATCGTGGTGAAAAAGATATTACAAAGGCACCAATTGAGCCACTCAAAAGTATTGTTATAGAGACTCAATTGGCAGACAAAAATGAACAAGAAAAGAAGAGCAAGGATGATGATGATGATAAAAGTGATGGAGTTTAA 780 0.3987 MAISHNTLAFAFGMMGNVISFLVFLAPISTFYRVYKKKSTEGFQSLPYLVALFSSMLWLYYAYLKKDAFLLITINSFGCVVETIYIILYIIYAPRDARNLTFKLLSAMNVGSFALILLVTNYAVHGPLLRVQVLGWICVSLSVSVFAAPLSIVAQVVRTKSVEFMPFNLSFTLTLSATMWFGYGLFLKDICIALPNVLGFGLGLLQIVVYAIYRNRGEKDITKAPIEPLKSIVIETQLADKNEQEKKSKDDDDDKSDGV 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g00017 259 Gene3D - 11 96 - -
Trre13g00017 259 FunFam Bidirectional sugar transporter SWEET 10 98 - -
Trre13g00017 259 Gene3D - 130 222 - -
Trre13g00017 259 PANTHER RAG1-ACTIVATING PROTEIN 1 14 243 IPR047664 -
Trre13g00017 259 FunFam Bidirectional sugar transporter SWEET 130 222 - -
Trre13g00017 259 Pfam Sugar efflux transporter for intercellular exchange 11 96 IPR004316 GO:0016020
Trre13g00017 259 Pfam Sugar efflux transporter for intercellular exchange 132 216 IPR004316 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g00017 Trre-Chr13 209995 212126 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g00017 3 259 Miscellaneous Gene Families AT5G13170 62.791 4.24e-112 322
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g00017 K15382 - gmx:100777741 396.356
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g00017 13 209995 212126 Trre13g00017 13 209995 212126 ECH