Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g04809 ATGGAGGCTGTTCTTCATTCAAAAGGGTTTCTTTCTCTTCCCACAAACCCCAAAAACAAGTTCTTAAACACATCAAATGGCTTAAAGCATAGATTTTTCTCACCAAACCCAAAAATCCTTGGTGGGTTTTCTCTAAATCCAAATGGGTTGCATAAACTCAATAGTTTAGCTTTAAAAGCTTCAATCTTTGATAAAAAAGACAAAAATTTGTTCATATGTAAAGCTGAAGCAGCTGCTGTTAATGGTGGTGGTGATGGGGAAGCAGTTTTTGAGGAATCAGAAATTGAGAAAGAAAAAATTTTGGGTGTTGAAATTACAACACTCAAGAAAATTATTCCTCTTGGAATGATGTTTTTTTGTATCTTGTTCAATTACACAATTCTAAGAGACACAAAAGATGTTCTTGTTGTGACTGCTAGAGGAAGTAGTGCTGAGATTATACCTTTTTTGAAAACTTGGGTGAATCTTCCTATGGCTATTGGTTTTATGTTGTTGTATACTAAATTGTCTAATGTTTTGTCAAAACAAGCACTTTTTTATTCTGTTATTGTTCCTTTTATTGCTTTCTTTGGTGCTTTTGGATTTGTTTTGTATCCTCTTAGCAACTATATTCATCCTCAAGCATTTGCTGATAATCTTCTTAATATACTTGGACCGCGGTTTCTTGGTCCTCTTGCAATTATGAGAATTTGGAGTTTTTGTTTGTTCTATGTCATGGCTGAATTGTGGGGGAGTGTGGTTGTTTCTGTCTTGTTTTGGGGACTTGCCAATCAGATAACTACGGTGGATGAAGCAAAGCGGTTCTATCCACTGTTTGGGCTTGGGGCCAATGTTGCCCTTATATTTTCTGGTCGGACAGTGAAATACTTTTCTAATCTGAGGAAAACTTTAGGTCCCGGAGTTGATGGTTGGGCCATCTCACTAAAAGCAATGATGAGCATTGTTGTCGGTATGGGACTTGTTATCTGTTTTCTGTATTGGTGGGTGAATAATTATGCTCCTCTCCCCGCTCGTAGCAAGAAGAAAAAGGAGAAGCCGAAAGTGGGAACAATGGAGAGCTTGAAGTTCTTGATGTCTTCAAGATATATAAGGGATCTTGCCACTTTAGTGGTTGCATATGGAATAAGCATTAATCTTGTTGAAGTTACATGGAAATCTAAGCTCAAAGCTCAGTTTCCTAGTCCGAATGAGTACTCGTCCTTTATGGGAGACTTCTCAACTGCAACCGGAATTGCTACCTTCACGATGATGCTTGTAAGCCAATTTATATTCGACAAATATGGATGGGGAGTTGCTGCGAAGATCACACCTTCTGTTCTCCTTTTGACCGGAGTTGGTTTCTTTTCTCTCATATTATTCGGGGATCCACTCGCACCCGTTATTGGAAAGCTTGGATTGACTCCACTGCTAGCTGCTGTATATGTCGGTGCCTTGCAAAACATATTCAGCAAGAGTGCTAAGTACAGCTTATTTGATCCATGCAAAGAAATGGCCTACATTCCCTTGGATGAGGATACCAAGGTCAAGGGAAAAGCAGCCATTGATGTTGTATGCAATCCATTAGGAAAATCTGGCGGTGCTCTAATTCAGCAGTTCATGATCCTAACATTTGGTTCACTAGCTAATTCAACTCCATACTTGGGAGGTGTGCTACTAGTGATTGTTCTTGCATGGTTAGCAGCAGCCAAGTCGCTCGACACTCAGTTTACCGCATTGCGTCGCGAAGAAGAACTCGAGAAAGAGATGGAAAGAGCAGGTGCCAATAAGATACCATTAGTGGCGGCTGAGAATGAGGAAGAAAATAGTTCTTTTGCACCTTTAAATACAGAAGCAGGTGACTATTCAGATTCATACAATGATTAA 1863 0.3956 MEAVLHSKGFLSLPTNPKNKFLNTSNGLKHRFFSPNPKILGGFSLNPNGLHKLNSLALKASIFDKKDKNLFICKAEAAAVNGGGDGEAVFEESEIEKEKILGVEITTLKKIIPLGMMFFCILFNYTILRDTKDVLVVTARGSSAEIIPFLKTWVNLPMAIGFMLLYTKLSNVLSKQALFYSVIVPFIAFFGAFGFVLYPLSNYIHPQAFADNLLNILGPRFLGPLAIMRIWSFCLFYVMAELWGSVVVSVLFWGLANQITTVDEAKRFYPLFGLGANVALIFSGRTVKYFSNLRKTLGPGVDGWAISLKAMMSIVVGMGLVICFLYWWVNNYAPLPARSKKKKEKPKVGTMESLKFLMSSRYIRDLATLVVAYGISINLVEVTWKSKLKAQFPSPNEYSSFMGDFSTATGIATFTMMLVSQFIFDKYGWGVAAKITPSVLLLTGVGFFSLILFGDPLAPVIGKLGLTPLLAAVYVGALQNIFSKSAKYSLFDPCKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQFMILTFGSLANSTPYLGGVLLVIVLAWLAAAKSLDTQFTALRREEELEKEMERAGANKIPLVAAENEEENSSFAPLNTEAGDYSDSYND 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g04809 620 NCBIfam NTP/NDP exchange transporter 103 569 IPR004667 GO:0005471|GO:0006862|GO:0016020
Trre11g04809 620 MobiDBLite consensus disorder prediction 590 620 - -
Trre11g04809 620 MobiDBLite consensus disorder prediction 601 620 - -
Trre11g04809 620 PANTHER - 63 605 IPR004667 GO:0005471|GO:0006862|GO:0016020
Trre11g04809 620 SUPERFAMILY MFS general substrate transporter 111 563 IPR036259 -
Trre11g04809 620 Pfam TLC ATP/ADP transporter 98 569 IPR004667 GO:0005471|GO:0006862|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g04809 Trre-Chr11 59254673 59257310 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g04809 1 603 Organic Solute Cotransporters AT1G80300 78.793 0.0 929
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g04809 K03301 - jre:108993173 995.727
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g04809 11 59254673 59257310 Trre11g04809 11 59254673 59257310 ECH
Trre11g04809 11 59254673 59257310 Trre7g00257 7 1730081 1734216 PCT