Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g04763 ATGAAAATCTCAAAAGAAACATGTTACTCTTACACACATCTCTTATGGCCATGTCAACCTCGTACGGATCAAAATCACATAGTTTTTTCCAACCGTTTTCGTGTCACCTGCACGGTGAGTCTTCTACTCTTGTTCACCACCGTCTACATTTTCTGGCCGTCAGATCCATATCTCAAGATCGTAGGGTTAAAAATGAAGAAGATTAAAATACATCATGTGCCGCGCATCACCGTAGATATATCTATGCTTCTCACGCTGAGAGTGCAAAATGCTGACGTGTATTCCATGGATTTCGGAACACTTGACGTGGCAGTATCTTATAGGGGGAAACCATTAGGTCACGTGACGTCGGAGAATGGGCACGTGAGGGCCATGGGATCTTCGTTTGTGGATGCTGACTTGGAGTTTGCTGGCATTGGTGTGTTGCCGGAGATAGTGTTCTTGTTGGAGGATTTGGCTAAGGGTACGGTGCCATTTGATACGGTTAGTCAAATTAGGGGCAAAATGGGAATTCTGTATTTTTACTTTCCTATTAAGGCTAAACTATCATGTGAGGTTTTAGTGAGTACAATAAATCAGACAATTGTTCGCCAACACTGTCTTCATGAGTGA 612 0.4297 MKISKETCYSYTHLLWPCQPRTDQNHIVFSNRFRVTCTVSLLLLFTTVYIFWPSDPYLKIVGLKMKKIKIHHVPRITVDISMLLTLRVQNADVYSMDFGTLDVAVSYRGKPLGHVTSENGHVRAMGSSFVDADLEFAGIGVLPEIVFLLEDLAKGTVPFDTVSQIRGKMGILYFYFPIKAKLSCEVLVSTINQTIVRQHCLHE 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g04763 203 Gene3D - 54 187 - -
Trre11g04763 203 Pfam Late embryogenesis abundant protein 85 171 IPR004864 -
Trre11g04763 203 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 36 200 - -
Trre11g04763 203 SUPERFAMILY LEA14-like 41 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g04763 Trre-Chr11 58936127 58938166 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g04763 - - cam:101505811 377.096
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g04763 11 58936127 58938166 Trre11g04763 11 58936127 58938166 ECH
Trre11g04763 11 58936127 58938166 Trre7g00301 7 1995662 1997318 PCT