Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g04653 ATGGCAAATACTATTGTAGTGGTTTTTGATTTCGACAAAACCATCGTCGAATGTGACAGTGATAACTGGGTTGTTGATGAGTTGGGTTTCACTGATTTGTTCAATGAACTATTTCCAACTATGCCATGGAACAATCTCATGGATAGGATGATGATGGAGCTTCATTCTCATGGAAAAACCATTGAAGATATTGTGCAAGTTTTGAAGAGGATTCCTATAAACCCTAGAATAATCCCTTCCATTAAAGCAGCATATGCTTTAGGGTGTGATTTGAGGGTTGTAAGTGATGCAAACACTTTTTTCATTGAGACAATTTTGAAGCACTTTGGAATTAGGGAATGTTTCTCTGAGATTAACACTAATCCAGGATATGTTGATGAAGAAGGAAGGTTGAAAATTTTGCCTTACCATGATCTCAATAAGCCTCCTCACCAATGTAATCTGTGCCCTCCAAACATGTGCAAGGGTCTAATCATAAATAGAATCCAAGACTCTTTATCATGTGAGGAGAATAAAAGGTTTATCTATCTTGGTGATGGTAGTGGAGATTATTGTCCTAGCTTAAGGCTTAAAGAAAAAGATTTTGTCATGCCAAGGAAGAATTTTCCTGTGTGGGACTTAATTTGCAAAGATCCTTCACTTGTTAAAGCTAAAATTTATGAATGGAGTGATGGTGAAGAACAAGAAAGGGTTTTGCATCAATTAATCAACAAAATTTCAATGGAAGAAAATGTTCAATGCATTTCAACTGAATTCAAGAAGCAAATTCCATCATTCAAGCCTCATGAGGCTTTACCTAAAGCTCTATCTGTTCAGATATGA 822 0.3601 MANTIVVVFDFDKTIVECDSDNWVVDELGFTDLFNELFPTMPWNNLMDRMMMELHSHGKTIEDIVQVLKRIPINPRIIPSIKAAYALGCDLRVVSDANTFFIETILKHFGIRECFSEINTNPGYVDEEGRLKILPYHDLNKPPHQCNLCPPNMCKGLIINRIQDSLSCEENKRFIYLGDGSGDYCPSLRLKEKDFVMPRKNFPVWDLICKDPSLVKAKIYEWSDGEEQERVLHQLINKISMEENVQCISTEFKKQIPSFKPHEALPKALSVQI 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g04653 273 NCBIfam HAD-IB family phosphatase 6 188 - -
Trre11g04653 273 PANTHER PHOSPHATASE, ORPHAN 1, 2 4 244 IPR016965 GO:0016791
Trre11g04653 273 NCBIfam MtnX-like HAD-IB family phosphatase 5 200 IPR006384 GO:0016791
Trre11g04653 273 Gene3D - 1 191 IPR023214 -
Trre11g04653 273 Pfam Putative Phosphatase 5 236 IPR016965 GO:0016791
Trre11g04653 273 SUPERFAMILY HAD-like 5 197 IPR036412 -
Trre11g04653 273 PIRSF PLP_phosphatas_PHOSPHO2 1 240 IPR016965 GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g04653 Trre-Chr11 58177628 58179930 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g04653 K13248 - gmx:100785878 427.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g05656 7 61903262 61904593 Trre11g04653 11 58177628 58179930 ECH
Trre11g04653 11 58177628 58179930 Trre11g04653 11 58177628 58179930 ECH
Trre15g00561 15 3968672 3981373 Trre11g04653 11 58177628 58179930 PCT