Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g04542 ATGGCGAATCTTGTTCCTGGGGTGCTTTTGAAGCTATTACAACACATGAACACAGATGTTAAAGTTGGTGGTGAACACAGATCATCACTTTTACAAGTTGTTAGCATTGTTCCAGCTCTTGCAGGTGGTGAACTTTTCCCAAATCAAGCTTCTTCACCTGTTCCTTTAATTCGTGGTGTTAAACCTGTTCCTGGTAGACATCCTTGTGTTGGTACACCTCAAGATATTGTTGCTACACATTCACTTTCATTTCTTGATAATAACAACAATAATAATAATGATGGTGGTAATAAGAACAACAAAAGTAGAGACAAAAATAATGTTGTTTGTTCTGAGAATCCTAGGAATGTGTTTGGTGTGAGTGTGAAGGATAAGGAGAAAAAGGAGAGAGTGAGATTAAGTTTAGGTGGTGGTGGTGGTGGTAGTTTTAAGGAAGAATCATCTGAGAAGAAAAATGGGATTTTTGGAAGAGTTGATAGTAAAAAGGAGTCTCAGAAAACAAAACCTGTGTTGAAGATTGATGTGAAGAAGGAATCATCATTACCTAAATCATTGACAAGATTGAGGTCGACGAATTCGAGGTCGATTCCTTCTTCGCCTAGTAGTGTTTATTCATTGCCTAATTCTTTTGAGAAATTTGCTAATGGTGTTAAGCAGCAGAGGGAAAAAGTTAGTGGTAAGGGAGTGGAGAAGGTTGAGGTGGGAAAGGCTGGGAAAAAAATTGTTATGGGAAATCCTATTAGAAATTTGGTGCAAGGGTTTGATTTTGGAGCTAAGGCTCTAAGAAAGAGTTGGGAAGGGAGTATGGAGGTTAAGACTACTAAAGAGTCTTCAAAAATCAAGGGTGCTGCTTCCAAGCCTGAAATTCATAGCTCAACTCCTAGGAGAAGCAGCATTTCAAACGAAAAGTTGCTGTCTAGAGAGGTTAAAGCACCAATAAAGCCCTCTAAGGAAGAACATAAGGCTCAGGTGTCTACAAAGACGGTTACTGCTAATGGAACTACAGAGGAACAAGAGAAGTTAAACAGAAGGACTTCCATTGGAAAGAAATCGGCGGAAGTTTCTAACAACGGGCTACCTGGAAACATGGTCAAAGTTTCTCTAAGTAGTAGAAAAGTGACAGATGCAAGTGTTCAATGGGCTTCACTCCCATCATCTATTTCAAAGCTTGGAAAGGAAGTAATGAGGCACAGAGATTCTGCACAGCTGGCTGCAATTGAGGCTATGCAAGAAGCCGCTGCAGCCGAGAGTTTATTACAATGTCTCAGTATGTATTCGGAGCTGACTAATTCTGCAAAGGAACATAACCCACAGCCAGCAGTAGAGCAGTTCTTAACTCTTCATGCTAGCCTGAATAGTACCCGAACAATTGCCGAATCCTTATTTAAACCCATTTCAGATGTTTCGTCTCCAGATCATGAAAAGAGCAAAGTGGAAGAAGCACTAAAACTAAAATCAGATAGACAAAAACATGCGGCTTCCTGGGTCCATGCAGCACTAGCCACCAACCTGTCATCTTTCGCTGTTTTTACAAAAGAATCTCAACCATCTAAGCTTCCAGCTTCGAGTAATAATTCTCAAAATCAAAAGTCTCCCGTTGGAAATCAACCAGCGTTAGTCCTACACAATTCAAGCGAAGATTCATCGTCAAAAGCTCGTGCAAAACCTCGTCCCATAGTTAATTCCAAGCTTGTCTCTCAAGGCATCCTTCCTCGCAAATCAACTGACGGTTCAGCAAATGGGCAAAAGCAACCGGTCCAACCACCCCCTGAATGGATCAAAGGAAATGGTCTCGACGAGGTTGTTGATTTGGCTGAGATGTTGCAGTTACAGTCCCGAGACTGGTTTTTGGGATTTGTTGAAAGATTCTTGGACAGTGATGGCGACACTACCTTGTCAGATAACGGCCAAATAGCAGGTATGCTCACTCAACTAAAGAGCGTAAACGATTGGTTAGACGAGATAGCGTTGAACAAGGACGAGGGAGAATCATGCCAGATATCAGCAGAGACAATCGACCGGTTGAGGAAGAAAATATACGAATATCTTCTTACACATGTTGAATCTGCTGCTGCTGCACTTAGCGGCGGATCACAATCACAAGCATTGCCTCTCAGATCCAAACAACACAGATTAAAGCCAAAAGATGAACAAGTGAATACATAA 2166 0.4146 MANLVPGVLLKLLQHMNTDVKVGGEHRSSLLQVVSIVPALAGGELFPNQASSPVPLIRGVKPVPGRHPCVGTPQDIVATHSLSFLDNNNNNNNDGGNKNNKSRDKNNVVCSENPRNVFGVSVKDKEKKERVRLSLGGGGGGSFKEESSEKKNGIFGRVDSKKESQKTKPVLKIDVKKESSLPKSLTRLRSTNSRSIPSSPSSVYSLPNSFEKFANGVKQQREKVSGKGVEKVEVGKAGKKIVMGNPIRNLVQGFDFGAKALRKSWEGSMEVKTTKESSKIKGAASKPEIHSSTPRRSSISNEKLLSREVKAPIKPSKEEHKAQVSTKTVTANGTTEEQEKLNRRTSIGKKSAEVSNNGLPGNMVKVSLSSRKVTDASVQWASLPSSISKLGKEVMRHRDSAQLAAIEAMQEAAAAESLLQCLSMYSELTNSAKEHNPQPAVEQFLTLHASLNSTRTIAESLFKPISDVSSPDHEKSKVEEALKLKSDRQKHAASWVHAALATNLSSFAVFTKESQPSKLPASSNNSQNQKSPVGNQPALVLHNSSEDSSSKARAKPRPIVNSKLVSQGILPRKSTDGSANGQKQPVQPPPEWIKGNGLDEVVDLAEMLQLQSRDWFLGFVERFLDSDGDTTLSDNGQIAGMLTQLKSVNDWLDEIALNKDEGESCQISAETIDRLRKKIYEYLLTHVESAAAALSGGSQSQALPLRSKQHRLKPKDEQVNT 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g04542 721 MobiDBLite consensus disorder prediction 516 594 - -
Trre11g04542 721 MobiDBLite consensus disorder prediction 144 169 - -
Trre11g04542 721 MobiDBLite consensus disorder prediction 516 547 - -
Trre11g04542 721 MobiDBLite consensus disorder prediction 84 112 - -
Trre11g04542 721 MobiDBLite consensus disorder prediction 267 358 - -
Trre11g04542 721 MobiDBLite consensus disorder prediction 567 585 - -
Trre11g04542 721 PANTHER EXPRESSED PROTEIN 1 50 IPR010341 -
Trre11g04542 721 Pfam Plant protein of unknown function (DUF936) 4 50 IPR010341 -
Trre11g04542 721 Pfam Plant protein of unknown function (DUF936) 50 694 IPR010341 -
Trre11g04542 721 MobiDBLite consensus disorder prediction 128 169 - -
Trre11g04542 721 MobiDBLite consensus disorder prediction 701 721 - -
Trre11g04542 721 MobiDBLite consensus disorder prediction 184 203 - -
Trre11g04542 721 MobiDBLite consensus disorder prediction 267 283 - -
Trre11g04542 721 MobiDBLite consensus disorder prediction 301 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g04542 Trre-Chr11 57537077 57541319 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g04542 - - cam:101502274 943.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g04542 11 57537077 57541319 Trre11g04542 11 57537077 57541319 ECH
Trre11g04542 11 57537077 57541319 Trre7g03013 7 27281096 27284126 PCT