Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g04533 ATGGCGTCAAGCAATGACATCCCAACAACAGGCACAGGCCTAATCGTAAGTTTCGGCGAGATGCTCATCGATTTCGTCCCAACAGCTTCCGGCGTATCACTCGCCGAAGCACCAGGTTTCCTCAAAGCCCCCGGCGGTGCACCGGCAAACGTTGCAATCGCGATCACCAGACTCGGAGGTAAATCAGCCTTCGTCGGTAAACTCGGTGACGATGAATTCGGTCACATGCTCGCCGGGATCTTGAAAGAAAACGGCGTTAAAGCTGAAGGTATAACGTTTGATGAAGGTGCAAGAACTGCTTTGGCTTTTGTTACTCTACGCGCTGATGGAGAGCGTGAGTTTATGTTTTATAGAAATCCTAGTGCTGACATGCTTCTTAAACCTGAAGAACTCAACCTCGAACTCATCAGATCTGCAAAAGTTTTCCACTATGGATCAATAAGCTTGATCGTTGAGCCATGCAGATCAGCACACTTGAAGGCACTGGAAGTGGCCAAAGAGGCTGGTTGCCTTCTATCCTATGATCCAAATCTCCGCCTACCCTTGTGGCCCTCGGCCGATGAAGCTCGCAAGCAAATACTGAGTATATGGGAAAAGGCTGATTTGATCAAGGTTAGTGATAATGAGCTGGAGTTCCTGACTGGAAGTGACAAAATTGATGATGCTACAGCTTTGACATTATGGCACCCCAATTTGAAGTTGCTTCTTGTCACTCTTGGTGAACATGGCGCAAGATACTACACCAAGAATTTCCATGGAACAGTAGAAGCATTCCATGTCAATACAGTTGATACAACCGGTGCCGGTGATTCCTTTGTTGGTGCTCTATTGGCCAAGATTGTTGATGATCAGTCCATACTAGAAGATGAACCAAGGTTAAGAGCAGTACTTAAGTTTGCAAATGCATGTGGAGCAATCACAACTACTAAAAAGGGAGCAATTCCTGCTCTTCCCAAAGAGGAGGATGCACTGAAACTGCTCAATGCATAG 990 0.4657 MASSNDIPTTGTGLIVSFGEMLIDFVPTASGVSLAEAPGFLKAPGGAPANVAIAITRLGGKSAFVGKLGDDEFGHMLAGILKENGVKAEGITFDEGARTALAFVTLRADGEREFMFYRNPSADMLLKPEELNLELIRSAKVFHYGSISLIVEPCRSAHLKALEVAKEAGCLLSYDPNLRLPLWPSADEARKQILSIWEKADLIKVSDNELEFLTGSDKIDDATALTLWHPNLKLLLVTLGEHGARYYTKNFHGTVEAFHVNTVDTTGAGDSFVGALLAKIVDDQSILEDEPRLRAVLKFANACGAITTTKKGAIPALPKEEDALKLLNA 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g04533 329 PRINTS Ribokinase signature 40 59 IPR002139 GO:0016301
Trre11g04533 329 PRINTS Ribokinase signature 235 246 IPR002139 GO:0016301
Trre11g04533 329 PRINTS Ribokinase signature 195 210 IPR002139 GO:0016301
Trre11g04533 329 SUPERFAMILY Ribokinase-like 15 326 IPR029056 -
Trre11g04533 329 ProSitePatterns pfkB family of carbohydrate kinases signature 1. 45 69 IPR002173 GO:0016301
Trre11g04533 329 Gene3D - 13 329 IPR029056 -
Trre11g04533 329 PANTHER HEXOKINASE FAMILY MEMBER 14 324 - -
Trre11g04533 329 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 264 277 IPR002173 GO:0016301
Trre11g04533 329 FunFam Probable fructokinase-2 12 329 - -
Trre11g04533 329 CDD bac_FRK 14 314 - -
Trre11g04533 329 Pfam pfkB family carbohydrate kinase 14 319 IPR011611 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g04533 Trre-Chr11 57469037 57471896 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g04533 K00847 - gmx:100803713 600.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g04533 11 57469037 57471896 Trre11g04533 11 57469037 57471896 ECH
Trre11g04533 11 57469037 57471896 Trre7g03029 7 27532796 27536159 PCT