Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g04522 ATGGGGGTTATGTCCAGGCGGGTTGTTCCCGCCTGTGGTAACCTCTGTGTTTTTTGTCCTTCTTTGCGAGCAAGATCAAGACAACCTGTCAAACGTTACAAGAAGTTGATTTCCGATATCTTACCTCGTAATCAGGCTGCTGAACTCAATGATAGAAAAATCGGAAAGTTATGTGAGTATGCTTCTAAGAATCCATTGAGAATTCCCAAGATTACAGAGAACCTGGAGCAAAGATGTTACAAGGATTTGCGTAATGAAAACTTTGGTTCTGTGAAAGTTATCTTATGCATATACAGAAAATTGCTGTCGTCATGTAAGGAGCAGATACCACTATTTGCCAGTAGTTTATTAGGGATCATTCGGACTCTTCTTGACCAAACTCGAGCAGATGAAGTGCGGATCTTAGGGTGCATTACTCTTGTAGATTTTATTTATTTCCAGACAGATGGTACATACATGTTCAACTTAGAGGGTTTTATCCCGAAACTATGTCAACTGGCTCAAGAAGTGGGAGATGATGATCGTGCTCTGCTTCTACGCTCAGCTGGACTACAAGCTCTATCTTCTATGGTAAAGTTCATGGGCGAGCACTCACATCTTTCCATGGATTTTGACAAAATTATATCAGCAATTTTGGAGAATTATACGGACCTTCAATTCAAATCCAACCTTGCCAACTTAGAGAAACTGAATTCACAATCTCAGAACCAATTGGTTCAAGGATTTCCTAAAGAAGAAGACCATATATCTTCCGCGTTGACTGTTGCGACAGGATTTGATACAGAGTCCAAGTTGGATACTGATAAGAATCCTGCTTATTGGTCAAAGGTTTGCTTGTATAATATAGCCAAGTTGGCAAAGGAAGCTACGACGGTGCGGCGTGTGCTGGAACCACTTTTTCATTATTTTGATACTGAGAATCACTGGTCTTCTGAAAAGGGGGTTGCTTATTGTGTTTTGATGTATTTGCAATCCCTTTTAGCTGAATCGGGAAATAACTCCCATCTTCTATTGTCCATATTGGTCAAGCACTTGGATCATAAAAATGTTACCAAGAAACCTATCCTTCAGATTGATATTATTAACATCACCACACAGGTTGCACACAATGTGAAGCAGCAAGCCTCAGTTGCACTCATTGGTGCAATATCTGATCTCATTAAACATTTAAGGAAATGCCTACAAAATTCAGCTGAAGCATCCGACATTGGAAATGATGCATATAAGTTTAATACTAAACTCCAATCTGCCATTGAAATGTGCATATTACAACTTTCAAACAAGGTTGGAGATGCAGGACCCATTCTTGATTTGATGGCTGTGGTGCTAGAGAATATTTCGAGTTCTACTATCATAGCAAGAACAACAATCTCTGCTGTGTATCAAACTGCAAAGATAATCACTTCCGTCCCTAATGTGTCATATCACAAGAAGGCTTTCCCTGATGCGTTGTTTCATCAATTACTCCTGACCATGGCTCATCTTGACCGTGAAACACAAATTGGAGCGCACAGTGTCTTCTCTGTGGTGCTTGTGCCATCCATGGTTTCTCCTTGGTTAGACCAAAAAAAGATTGCTAAGAAGGTAGAGAGTCACAGCCTCTCCATTCAGCGTGGAAGTTTTTCTAGAGCTGAGCACTTAAATGGGAAACTGGTAGAAGAAAAGGTAATAGCAGGTGTGAGTGGAAATAAAATTTTCACTCATGCTCTAATTGATGGAAAAGATGATCCAGGATCTCTTAGGTTGAGCAGTCACCAAGTGAGTCTTTTGCTTTCTTCAATCTGGGTTCAGGCAACATCTGCTGAAAATGGCCCTGCAAACTATGAGGCAATGGCGCACACTTATAGCATTGCTTTATTATTTACTCGTTCTAAGACATCCAGTTACATGGGTTTAGTAAGATGCTTCCAACTGGCATTTTCCCTCAGGAGCATTTCTTTGGACCAAGAAGGAGGCTTACCGCCATCTCGCAGGAGGTCCCTTTTATCCTTGGCTTCACACATGCTTGTATTCTCTGCCAGGGCAGGCAATTTCCCTGATCTGATTCCCAAAGTCAAAGCATCCCTGACAGTAGATCCGTTTCTTGAATTGGTGGATGATACCCTGCTGCGGGCTGTTCGTCTAAAATCAGATAAGATAATTTATGGATCCGAGGAAGATGAAGTTGCTGCTATGAAGTCATTATCAGCTGTACAATTGGATGACAGACAGTTGAAAGAGACTGTAACATCATACTTTATGACTAAATTTTCAAAATTGCCGGAGGATGACTTGTCCAGCATAAAAAATCAACTTCTACAGGGTTTTTCTCCTGATGATGCTTATCCATCGGGACCTGCATTGTTTATGGAGACACCAAGGCCAGGTTCTCCACTTGCTCAGATAGAGTTCCCTGGTTTTGATGAGATAATGGCTCCAGGAGATTTGATGGATGAAGAGACTGGGCCTGAACTAAGTGGAAGCCAGTCAGATCGCAGAACATCACTTTCAACCAACTGTCCAGATGTTCTAGGTGTTAATCAACTCTTGGAATCGGTTTTGGAAACTGCTCGGCAAGTTGCGAGCGTATCCACTTCCTCAACTCCTTTACCTTATGACCAAATGAAGAACCAGTGTGAGGCCCTTGTAACAGGGAAACAACAGAAGATGTCATCCATTTACAGTTTTAGGCACCAACAGGAGACCAAGGCCATTGTTCTTTCAAGTGAAAATGAAGTAGAAGTTTCCCGTCAACCTGTTAAGGCACTAGAGTATTCAAAAGGTGATTTGAAGTTGGTAGCTCAGGAGCAATTTCAAGAACAGGATCACGTTCGCTTCCTTTCACACGACACTAGGCAGCATCATTCTTTGAGACTTCCACCTTCAAGCCCCTATGATAAATTTTTGAAAGCTGCAGGATGCTAA 2904 0.416 MGVMSRRVVPACGNLCVFCPSLRARSRQPVKRYKKLISDILPRNQAAELNDRKIGKLCEYASKNPLRIPKITENLEQRCYKDLRNENFGSVKVILCIYRKLLSSCKEQIPLFASSLLGIIRTLLDQTRADEVRILGCITLVDFIYFQTDGTYMFNLEGFIPKLCQLAQEVGDDDRALLLRSAGLQALSSMVKFMGEHSHLSMDFDKIISAILENYTDLQFKSNLANLEKLNSQSQNQLVQGFPKEEDHISSALTVATGFDTESKLDTDKNPAYWSKVCLYNIAKLAKEATTVRRVLEPLFHYFDTENHWSSEKGVAYCVLMYLQSLLAESGNNSHLLLSILVKHLDHKNVTKKPILQIDIINITTQVAHNVKQQASVALIGAISDLIKHLRKCLQNSAEASDIGNDAYKFNTKLQSAIEMCILQLSNKVGDAGPILDLMAVVLENISSSTIIARTTISAVYQTAKIITSVPNVSYHKKAFPDALFHQLLLTMAHLDRETQIGAHSVFSVVLVPSMVSPWLDQKKIAKKVESHSLSIQRGSFSRAEHLNGKLVEEKVIAGVSGNKIFTHALIDGKDDPGSLRLSSHQVSLLLSSIWVQATSAENGPANYEAMAHTYSIALLFTRSKTSSYMGLVRCFQLAFSLRSISLDQEGGLPPSRRRSLLSLASHMLVFSARAGNFPDLIPKVKASLTVDPFLELVDDTLLRAVRLKSDKIIYGSEEDEVAAMKSLSAVQLDDRQLKETVTSYFMTKFSKLPEDDLSSIKNQLLQGFSPDDAYPSGPALFMETPRPGSPLAQIEFPGFDEIMAPGDLMDEETGPELSGSQSDRRTSLSTNCPDVLGVNQLLESVLETARQVASVSTSSTPLPYDQMKNQCEALVTGKQQKMSSIYSFRHQQETKAIVLSSENEVEVSRQPVKALEYSKGDLKLVAQEQFQEQDHVRFLSHDTRQHHSLRLPPSSPYDKFLKAAGC 967
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g04522 967 PANTHER PUTATIVE, EXPRESSED-RELATED 1 555 - -
Trre11g04522 967 MobiDBLite consensus disorder prediction 816 831 - -
Trre11g04522 967 MobiDBLite consensus disorder prediction 806 831 - -
Trre11g04522 967 SUPERFAMILY ARM repeat 69 453 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g04522 Trre-Chr11 57397304 57406324 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g04522 K21842 - gmx:100806860 1491.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g04522 11 57397304 57406324 Trre11g04522 11 57397304 57406324 ECH
Trre11g04522 11 57397304 57406324 Trre7g03049 7 27758418 27767381 PCT