Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g04458 ATGCCTCAGCCAGAACGTGCTTGCAAACATGTTGATACTACACCAAGAAGTCCTAGCATTGCTACCATGGAACAATTCCTCCGAGGAGGGGAATCCACAAGGATGTCACCAACCTACTCCACCTCCCCTTCTTCCCCTTCCTCTTCTTACTTTGAGAAGGTGAAGCACCATGACCCTGAAGAAGATCAGGGTCTCTATCAGAGAAAATCTGTTCTCGCCAAAGTGAAGGAGAGGGCCAGGAAATTAGTATCGCGCAACAGCCTCAGCAGGAGAAGACAGGACGAAGATAATTTTACTCCGTCTTGGGGTGTTAGTTTAGACGATGAAGATGGAGAAGAAGAAGATGCTGAGTACCTTGGAGCTCCAATCTATGAATCAGAGCTAGCTCCTGAGGAATACAAAGAAAATGCAAGACAACATCCAAGAGCAAATCCAGTAATCTCCGAGAAGCGCGTTTTGAAGACGATGAAATCAGGAGAACAACAAGATCAACAAAATGCACTTAGTCCTGTAAAATCCTCAACAACAATAACTCCTCAACTTGCAACAACAACATCAACTACTACTAATAGTCCAAACCAAAACACAACATTAACTCATGAGAAACTCACACCATCCATTGTTCATAAAACAACAAAAGCATTATCTCATTCTGCTTCCTCAAAACCTCATGTTAGTACCATAATTACCCCTGTTTCTCCTATGAGTACTTCACCAATAATGCAAAATAATTCTTCATCATCATCATCTTCTCCGTCGAATCACGTGAAGTTTGCTACTAGTCCCAAAAGTCCATATAATTCTCAAGCATTAATGAGTCCTAGGAGAAATTCTAATGGTAGTAGTGTGATTGAGAAGATGAAAGGAGCTGTAAATTCTTTGCTAAGAAATGATGAACAACCACAACAAAAATATGGTGTAAGAAGTCCTACAACACGTGCTAATTCTTCACACATAAGCAACACTACTACTCAAGAAGTAGGTCAAGGAGCTGAGAACCATGGAAGAATTCTTCAGACAAATTAA 1026 0.4084 MPQPERACKHVDTTPRSPSIATMEQFLRGGESTRMSPTYSTSPSSPSSSYFEKVKHHDPEEDQGLYQRKSVLAKVKERARKLVSRNSLSRRRQDEDNFTPSWGVSLDDEDGEEEDAEYLGAPIYESELAPEEYKENARQHPRANPVISEKRVLKTMKSGEQQDQQNALSPVKSSTTITPQLATTTSTTTNSPNQNTTLTHEKLTPSIVHKTTKALSHSASSKPHVSTIITPVSPMSTSPIMQNNSSSSSSSPSNHVKFATSPKSPYNSQALMSPRRNSNGSSVIEKMKGAVNSLLRNDEQPQQKYGVRSPTTRANSSHISNTTTQEVGQGAENHGRILQTN 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g04458 341 MobiDBLite consensus disorder prediction 77 114 - -
Trre11g04458 341 MobiDBLite consensus disorder prediction 29 50 - -
Trre11g04458 341 MobiDBLite consensus disorder prediction 294 341 - -
Trre11g04458 341 MobiDBLite consensus disorder prediction 1 65 - -
Trre11g04458 341 MobiDBLite consensus disorder prediction 51 65 - -
Trre11g04458 341 MobiDBLite consensus disorder prediction 77 97 - -
Trre11g04458 341 MobiDBLite consensus disorder prediction 155 281 - -
Trre11g04458 341 MobiDBLite consensus disorder prediction 158 281 - -
Trre11g04458 341 PANTHER LOW-TEMPERATURE-INDUCED 65 KDA PROTEIN-RELATED 30 221 IPR037491 GO:0009737
Trre11g04458 341 MobiDBLite consensus disorder prediction 295 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g04458 Trre-Chr11 56832425 56834708 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g04458 - - mtr:11414017 388.652
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g04458 11 56832425 56834708 Trre7g03226 7 30450390 30452406 PCT