Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g04444 ATGGAAAACGGAGATCATCAGTTCCAGAAATCAAAAGCCAAATATGATTGTCTTTTATTTGATCTTGATGATACACTTTATCCATTCAGTTCTGGATTATCAGGACACGTCACCAAAAATATTCAAGAGTATATGATTGAAAAGCTTGGGATACAAGAAGATAAAGTTCCTGAATTGTGTGTTTCTTTATATAAGATTTATGGGACAACGATGGCTGGTCTCAAGGCAATTGGCTATGATTTTGACTATGATGACTTTCATGGATTTGTTCATGGGAGATTGCCATATAATATGTTAAAACCTGACCCTGTTCTTAGGGGAATTTTGCTTAGCCTACCCTTTCGAAAAATTGTTTTTACAAACTCAGATGAGGCACATGCAAATAGAGTGCTTCACAGGCTTGGACTGGAGGATTGTTTTGAAAGAATCATAAGCTTTGAGACTCTAAATTCTTCCAATTCCAATAACATCAATTCTACTCACAATAAAGATGGCAGTGAATCTAAACAAAGTTCCACAGGAATATTTGATTTTTATGAGTACATCTGTAGGCCTAATGCTGATATTGTGCTTCCAAAGACCCCAGTTGTCTGTAAACCCTTTCAAGATGCATTTGAAAAGGTTTTTAAGATGATAGATGTTAACCCTCATAGAACATTGTTCTTTGATGACAGTATCCGTAATATACAGACAGGAAAATCCTTAGGCCTTCACACAGTCTTGGTGGGTACTTCCCTTAGAACTAAAGGAGTGGATCATGGCTTGGAGAGCATCCATAATATGAAGGAAGCATTTCCAGAATTGTGGGAAACTGATGAGAAGAGTAAAAGTGTCAAGTATTCTAGAAAGGTTGCAATTGAAACATCAGTTATAGCTTAA 879 0.3629 MENGDHQFQKSKAKYDCLLFDLDDTLYPFSSGLSGHVTKNIQEYMIEKLGIQEDKVPELCVSLYKIYGTTMAGLKAIGYDFDYDDFHGFVHGRLPYNMLKPDPVLRGILLSLPFRKIVFTNSDEAHANRVLHRLGLEDCFERIISFETLNSSNSNNINSTHNKDGSESKQSSTGIFDFYEYICRPNADIVLPKTPVVCKPFQDAFEKVFKMIDVNPHRTLFFDDSIRNIQTGKSLGLHTVLVGTSLRTKGVDHGLESIHNMKEAFPELWETDEKSKSVKYSRKVAIETSVIA 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g04444 292 NCBIfam HAD-IA family hydrolase 194 242 IPR006439 -
Trre11g04444 292 SUPERFAMILY HAD-like 17 245 IPR036412 -
Trre11g04444 292 Gene3D - 81 269 IPR023214 -
Trre11g04444 292 SFLD C1.5.3: 5'-Nucleotidase Like 10 273 IPR010237 -
Trre11g04444 292 SFLD Haloacid Dehalogenase 10 273 - -
Trre11g04444 292 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE 7 290 - -
Trre11g04444 292 NCBIfam pyrimidine 5'-nucleotidase 16 242 IPR010237 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g04444 Trre-Chr11 56724749 56727143 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g04444 K07025 - gmx:100790444 456.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g04444 11 56724749 56727143 Trre7g03242 7 30762891 30765549 PCT