Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g04435 ATGAATATGTTACCAAGCACTAGCGGCACCACCACAACCACAACCACCGCTTTGGGTGGTTGGACGGTGCTACAATTATCCAAAATCAGAAACAACCGCTCTGTTTCTTCTTCATTCTCTCTTCGGATCTCTGCCACCTGTGACGACCGTCCTCATGGTCCATCCTGTATATATGTTGGTCCTCTTCAAACTGCCACACAAGAGACTCTTGAAGCTCTTTATTCTCAAGCAAGAGATGCATATTACAGAGGAGAGCCTTTGATAGTTGATGACATGTTTGATAGAATAGAGTTGAAGCTTAAGTGGTATGGTTCCAAATCAGTTGTGAAGTATCCTCGATGCAGTATCAGGAGGCAATCAACTTATGCTGATGCCGAGGAAGATCTATCTATGGTTTTTACATTGGCAAGTACATGGGCCCTATTTTTTGCATTTGGCAGTTCAGCATGTGTTGGGCCAATGTTTTACACCATCAACTTAGCTTATCAAAATGCAACGAATTTAGGATTATCATACGGTAGCCATGCATCAGAACTAAAGCCTCTTTTCATGGTGAATACCATTATCTTTATGGCACTCGGTTTTATCATAGGATATCCAGTTGCTTCAGCTTCAGTTAAAGTACTTCAAGGCTTGTGGAGAAATGACTTAGCAGCACTAAAGGGTTCATGTCCAAATTGTGGAGACGAGGTATTTGCATTTGTAAAAACGGATAAGACTAACAACTCACCCCATAGAGCAAAGTGCCATGTGTGTGAATGCTTATTGGAATTTCGCACTGAAGTCGAGCAATCCACTTCAAGATTTGGTAGACAATGGGTTTATGGGCGTATTTACCTTGTGCGTAGATCCAGACGCCAAAGGGAGCTGTAA 873 0.4227 MNMLPSTSGTTTTTTTALGGWTVLQLSKIRNNRSVSSSFSLRISATCDDRPHGPSCIYVGPLQTATQETLEALYSQARDAYYRGEPLIVDDMFDRIELKLKWYGSKSVVKYPRCSIRRQSTYADAEEDLSMVFTLASTWALFFAFGSSACVGPMFYTINLAYQNATNLGLSYGSHASELKPLFMVNTIIFMALGFIIGYPVASASVKVLQGLWRNDLAALKGSCPNCGDEVFAFVKTDKTNNSPHRAKCHVCECLLEFRTEVEQSTSRFGRQWVYGRIYLVRRSRRQREL 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g04435 290 Coils Coil 283 290 - -
Trre11g04435 290 PANTHER PGR5-LIKE PROTEIN 1B, CHLOROPLASTIC 50 283 IPR039987 GO:0009535|GO:0009773|GO:0016730
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g04435 Trre-Chr11 56675587 56678347 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g04435 - - gmx:100791480 421.779
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g04435 11 56675587 56678347 Trre11g04435 11 56675587 56678347 ECH
Trre11g04435 11 56675587 56678347 Trre7g03249 7 30836891 30839152 PCT