Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g04379 ATGAAAGACCCTCTTGGTTCCATATTCTATTATGAAGAAAGTCCTGATCAATTGAGGCAAAAGCTTATGGACACAATGGTTGAACTAGAAGAAGCAAGGAATGTGAAGAATGAATTGCTTAACATGATTCAAATAGCTAATAAAGAAAGAGATCAAGCTAGAGAACAACTTCAATATCTAAAGAAAAAAATTGTCCCTACAAACACAAACATGTTTTTTGACAACAACATTAACAACCTTGTAATGTTTCATTCGACCAAAGCAAATTCAAGCATAACAGAATCCAACAGTCCATCACAAATGTCATCTCCAGTTGAAGCTGTTTCATCTCCTGAGTTTTCAAATGTTGGTGTTGATTCACATAATAACAACATGTGTTTTTTCAAAAGGTTGGTTAATAATAAGTTTGATCAAGTTAATGATGTTGGAAATGCTATTATTGATTCTCTTGTTAGAGGAAAAGTTTTACCACAAAAGGGAAAACTTCTTGATGCTGTTATCAATGCTGGTCCTTTGATTCAAAATCTTGTTCTTTCTGGGCCACTTCCAAATTGGAAAAATCCACCACCTCCTTTGAATTCTATACAAATTCCACCTTTTGATATTAAGGAGATTGATGAACTCAACTTATTTCAGAATTCAATACTTCCATCTTCTTCTTACTCTTCTGGGTCAATGCCAATTCTCAATGTTGGTGGTGTCACACCTAGCTCTTTCAACAAGAGGCCTTGGCAGTTTACTTCAAATTCTAGCTTCAAGAAACAAAAGCATCAATATTTTTCATGA 786 0.341 MKDPLGSIFYYEESPDQLRQKLMDTMVELEEARNVKNELLNMIQIANKERDQAREQLQYLKKKIVPTNTNMFFDNNINNLVMFHSTKANSSITESNSPSQMSSPVEAVSSPEFSNVGVDSHNNNMCFFKRLVNNKFDQVNDVGNAIIDSLVRGKVLPQKGKLLDAVINAGPLIQNLVLSGPLPNWKNPPPPLNSIQIPPFDIKEIDELNLFQNSILPSSSYSSGSMPILNVGGVTPSSFNKRPWQFTSNSSFKKQKHQYFS 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g04379 261 Coils Coil 29 63 - -
Trre11g04379 261 Pfam Protein of unknown function (DUF1635) 14 217 IPR012862 -
Trre11g04379 261 PANTHER ENABLED-LIKE PROTEIN (DUF1635) 9 215 IPR012862 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g04379 Trre-Chr11 56266850 56268631 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g04379 - - mtr:11417591 306.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g04379 11 56266850 56268631 Trre11g04379 11 56266850 56268631 ECH
Trre11g04379 11 56266850 56268631 Trre7g03376 7 39060764 39061327 PCT