Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g04232 ATGAAAAACCAATTACAAGATTCCAAAGAATCAGTTCAGGCTCAACCTTTGGTGAACGAGACTTTGCGACAACTCGAGGCAGCAAAAAGAACTGTAGAGTTCTTAAGAGCTAATGCTGCAAAATCTGTGATTGGATACAACTGTGCTTCTTCAGAGATAGACCAGTCAAGAACACCCATGAACTCACTCAAGCCTCGTGTGCATGATGCTCATTTGGAAATGGAAGACGGAGCAATTGAAACGGGAGATAGTACTAATCAGATTGAAGCCGAGTTACAATCTTTGAGGTCTGAGGTTGAATTACTGAGGTCTGCGATTGAGATTGCCGAGACTAAATTCCATGAAGAACAGATTCAGAATACGGTGAAGATTAGGAACGCTTATGAGTTTATCGAACAGATAAAACTAGAATCGAGTCTGAGGGAATCTGAATTGGAAAAAAAGAAAGCTGAAATTAAGAAATTGAAGGAGAATTTGATGGATAAGGATAATGAGTTGCAAGGTGTTGTTGATGAGAATGACAGATTGAATTTGACGCTTGAAAAGATCACGTCGTTGTCATCAAAAAAAGAACAAGAACTTCAGAAGGAACTTAACAGGTTAGACGAATGTGTCGCTGCGTTGAAGGGTGAAATGATGGATAAGGAAACAACATTGCAAAGCATAACCGAAGAAAACGAAATACTAAAGATGGAAATCAACAAGAGGTTCACATTCGCACATGTTGGCGTAGCAAGGGAGGATGTTGCAGTCGAAATAGGTGCAGCTAAGGCTGCAGAACGTGACGCTTTTGCTAAACTTAAGATAATGATGGAGGAGGCAGAAAGGAGTAATCGTAAGGCAGCAATGGTGGCCGAGATGCTTGAAGCAGCGCAAGCGACGAATACCAAAAAAGAAGCTGAATTGAAGAGAATCAAGGTCCAATGTGATCAGTGGAGGAAGGCTGCAGAGACAGCTGCTGCTATGTTTTCGACCAGGAACGAAGGGACGATCGCTGAGAGATCGATGTCAATGGACAACTACAACAACAATGTGATGAAGACTAAGTACTTGAATTTTTGTGATGAGATAGATGATTGGAGTGATTTGCAAAGAAAGAAAAATGGGAATGTGTTGAAGAAGATTGGTGTCTTATGGAAGAAGCCTCAAAAAACAGTGATTGATTCATGA 1170 0.4085 MKNQLQDSKESVQAQPLVNETLRQLEAAKRTVEFLRANAAKSVIGYNCASSEIDQSRTPMNSLKPRVHDAHLEMEDGAIETGDSTNQIEAELQSLRSEVELLRSAIEIAETKFHEEQIQNTVKIRNAYEFIEQIKLESSLRESELEKKKAEIKKLKENLMDKDNELQGVVDENDRLNLTLEKITSLSSKKEQELQKELNRLDECVAALKGEMMDKETTLQSITEENEILKMEINKRFTFAHVGVAREDVAVEIGAAKAAERDAFAKLKIMMEEAERSNRKAAMVAEMLEAAQATNTKKEAELKRIKVQCDQWRKAAETAAAMFSTRNEGTIAERSMSMDNYNNNVMKTKYLNFCDEIDDWSDLQRKKNGNVLKKIGVLWKKPQKTVIDS 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g04232 389 PANTHER INTERACTOR OF CONSTITUTIVE ACTIVE ROPS 2, CHLOROPLASTIC-RELATED 1 384 IPR029688 -
Trre11g04232 389 Coils Coil 271 315 - -
Trre11g04232 389 Coils Coil 191 232 - -
Trre11g04232 389 Coils Coil 133 172 - -
Trre11g04232 389 Coils Coil 85 112 - -
Trre11g04232 389 Coils Coil 18 38 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g04232 Trre-Chr11 55015411 55016580 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g04232 - - tpra:123893984 583.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g04232 11 55015411 55016580 Trre11g04232 11 55015411 55016580 ECH
Trre11g04232 11 55015411 55016580 Trre7g01663 7 12741112 12744427 PCT