Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g03823 ATGGATTCATCTAATTCAACAAACATCACCACAATCCACCCAGACATAATTCAATCACACATCCTCACACGTCTCGACGGCACAGCTCTCACCTCCGCCGCCTCCACCACCTCCCACCTCCACCATCTCTGCACTGAAAATCATCTCTGGCATAAAATCACCACCGCAACGTGGCCTTCTCTCAACGAACCTCTCGCAACATCACTCATCTCCACCTTCAGAAACTCTCACCGTTCCATTTTCTCCGACTCTTTCCCCTCCGTCAATTACTCCGCCGCCTCAACACCGTCAGATTCTTCATCAACGTCGTCGCTGAAAGAATTAATCTCCGCCGTTGATTTATACTACAAGGGCAAATCCGTCTTTTCAAAAGTTATTAAAACCGAAACACATAAGGGATGGTTCTTATGTTCACCTTTATGGATTGAAATTCTCGAACCAAACGAGATTATTGAAACACCTATAAAATTCGAGCAAAACGACGTCGTTGAATGGCTTGAAAATAATTTAAGTTTAAGCTGGATTATGATTTCACCGACACGTAAGCGTTCGGTTAACCTATCAAGCCGGTTACCGGTAACAGTTAGACGTCATTGGTTAACTGGTGAGTTAGAGGTTTTATACGCTGTGGTTATGGGATTAGTGCAGTGCACGATAAAGGTCACGTGCTGTGGTAAAGCTGGGGGAGAAATGCACGTGAGGGAGGTGAGTTTAACTATGGAGGATATGGATGGAAGACATTTGATTGGGAGGGATAGTTTGGGGATTTTACAAGAGGTGATGGAAAATGGTGAGAGGAAGAAAGTGGATGTTGAGAAAATGAAGAGGGGTTTTGAGGAATTTTGTTTGATGAAGAGTGAGAGAAGAGAGAGAAAGTTGAAGAGAGAAAGGGTAATTGATATGGTTATTATGTTGATTGCTATTTTCATTTTTGCATTTCTTTTTAGGTTTGTGAGGTTATGGGTTTCATCCAAATGA 978 0.4264 MDSSNSTNITTIHPDIIQSHILTRLDGTALTSAASTTSHLHHLCTENHLWHKITTATWPSLNEPLATSLISTFRNSHRSIFSDSFPSVNYSAASTPSDSSSTSSLKELISAVDLYYKGKSVFSKVIKTETHKGWFLCSPLWIEILEPNEIIETPIKFEQNDVVEWLENNLSLSWIMISPTRKRSVNLSSRLPVTVRRHWLTGELEVLYAVVMGLVQCTIKVTCCGKAGGEMHVREVSLTMEDMDGRHLIGRDSLGILQEVMENGERKKVDVEKMKRGFEEFCLMKSERRERKLKRERVIDMVIMLIAIFIFAFLFRFVRLWVSSK 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g03823 325 SUPERFAMILY F-box domain 14 76 IPR036047 GO:0005515
Trre11g03823 325 PANTHER F-BOX PROTEIN-RELATED 2 315 IPR045283 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g03823 Trre-Chr11 51516176 51517153 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g03823 - - gmx:100781337 394.815
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g03823 11 51516176 51517153 Trre11g03823 11 51516176 51517153 ECH
Trre11g03823 11 51516176 51517153 Trre7g01413 7 10410494 10411516 PCT