Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g03643 ATGTTGGAACTAAAGAGTCCCCTCAAGAATAACAAATTCTATGTCAAAATGAAGCTCATGAATAAACATAACACAAAACCTCAACAAGATAAAACATGTTTCTTTTTCACATATTACAAATGGGTTCTTTGGCTTTCTCTTTCCCTCTATTTCTTCACATCTTATCTCATCACCAATGACCCACAAAACCCAACAACATCAACCATTGTCTCAAATTCTAATTCCAATGTTGTTTCTCATATCACTAAAGGGGTGTTGAAAAATTTGAAGGTGTTTATTTATGAGCTACCATCAAAATACAACAATGATTGGCTTTCAAATGGGAGGTGCAAAACACATTTATTTGCTTCAGAAGTTGCTATTCATACCGCATTGTTGAAAAGCGATGTTAGAACATTTGACCCTTATGAAGCTGATTTCTTCTTCGTTCCGGTTTATGTTTCTTGCAACTTCAGCACGATTAACGGTTTTCCGGCAATTGGACATGCCCGTGCTCTTATTTCCTCGGCCGTTGAACTTGTCTCAACCGAATATCCATTTTGGAATCGAAGCAGAGGATCCGACCATGTTTTCGTTGCTTCTCATGATTTCGGCGCATGTTTCCATACCCTGGAGGATAATGCGATTCGTGAGGGAATACCGGCAATATTGAAGAATTCGATTGTGTTGCAAACATTTGGGGTTGAGCATGAACATCCTTGTCAGGATGTTGAGAATGTGGTGATACCGCCATACGTTTCACCGGAAAAGGTGCGGAGGACACTTGAGAAAGCTCCGGTGGACGGACGGCGAGATATTTGGGCTTTTTTCAGAGGGAAAATGGAAGTTCATCCTAAAAACGTCAGTGGACGGTATTACAGCAAGCGAGTGCGAACTGATATATGGAGAAAATTCAATGGTGATCGGAGATTTTACCTACAGCGGCACAGATATTCGGGTTATCAAATGGAAATCGCACGATCAGTGTTTTGTCTATGTCCACTTGGGTGGGCGCCTTGGAGTCCAAGACTCGTAGAATCAGTAGCATTAGGTTGTGTGCCCGTAATAATCGCCGATGGAATCCGTTTACCATTTTCCTCCGCCGTAAACTGGGCGGATATATCACTCACAGTGGCGGAAAAAGATGTCGGAAAACTCGACAAAATCCTACAGCGCGTGGCAGCAACAAACCTAACAGTAATTCAGAAGAATCTATGGGACCCAAAAACAAGACGGGCCCTACTTTTCAACAATGAAATCCAACAAGGTGATGCCACGTGGCAGGTATTGGTTAGTTTGAGTGAGAAGCTTGGTAGGTCATACCGTAGGTCTATGGTTTCTAGCGAATCAGAAAGTGACACGTGA 1344 0.4234 MLELKSPLKNNKFYVKMKLMNKHNTKPQQDKTCFFFTYYKWVLWLSLSLYFFTSYLITNDPQNPTTSTIVSNSNSNVVSHITKGVLKNLKVFIYELPSKYNNDWLSNGRCKTHLFASEVAIHTALLKSDVRTFDPYEADFFFVPVYVSCNFSTINGFPAIGHARALISSAVELVSTEYPFWNRSRGSDHVFVASHDFGACFHTLEDNAIREGIPAILKNSIVLQTFGVEHEHPCQDVENVVIPPYVSPEKVRRTLEKAPVDGRRDIWAFFRGKMEVHPKNVSGRYYSKRVRTDIWRKFNGDRRFYLQRHRYSGYQMEIARSVFCLCPLGWAPWSPRLVESVALGCVPVIIADGIRLPFSSAVNWADISLTVAEKDVGKLDKILQRVAATNLTVIQKNLWDPKTRRALLFNNEIQQGDATWQVLVSLSEKLGRSYRRSMVSSESESDT 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g03643 447 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 73 406 IPR004263 GO:0006486|GO:0016757
Trre11g03643 447 Pfam Exostosin family 87 385 IPR040911 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g03643 Trre-Chr11 49695544 49697781 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g03643 K20889 - gmx:100807050 720.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g03643 11 49695544 49697781 Trre11g03643 11 49695544 49697781 ECH
Trre11g03643 11 49695544 49697781 Trre7g01545 7 11653123 11655218 PCT