Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g03599 ATGACTACTACAAGCAGACTCAAATCCGTCGATTTTTACAGAAAAATCCCAAGAGATTTAACTGAGGCATCATTATCTGGAGCAGGGTTATCCATAGTAGCAGCTCTCGCCATGGTGTTTTTATTTGGAATGGAACTTAATGAATATTTATCTGTCACTACCTCTACATCTGTGATTGTTGACAAGAGTTCTGATGGGGACTTTTTAAGGATAGATTTCAATTTCAGTTTTCCTGCACTCTCATGTGAGTTTGCATCGGTTGATGTCAGTGATGTGCTGGGAACAAACAGGCTGAATCTAACAAAAACAGTTCGCAAGTTTTCTATTGATTCAAATTTAAGACCCACGGGGTATGAGTTTCATTCAGGCCCGTCTACCAACGTCATTAAGCATGATGATAAAGTAGATGAAGAATCCCTTGAAGGTGCTTTTGTATTCACGTCAGACAATTTTGATAAATATGCTCATCAATTTCCAATTACAGCCATAAATTTTTATGCTCCTTGGTGTTACTGGAGTCAACGCTTGAGACCTTCATGGGAGAAGGCAGCTAAAATAATAAGAGAGAGATATGATCCAGAAATGGATGGTCGAATATTTTTGGGGAAGGTAGATTGCACTCAAGAAGGAGACTTGTGCCGGAGGCATCACATACAAGGGTATCCGTCCATTCGTATCTTTCGTAAAGGAACTGATATCAGAAGTGATCACGGACATCATGAACATGAGTCCTATTATGGAGATCGTGATACAGATAGCCTTGTTAAGACAATGGAGAATTTAGTAGCATCTCTCCCTTCAGAGTCTCAGAAGCTAGCTTTGGAGGATAAATTAAATGTTACAGAGAATGCAAAAAGAGCAGCACCATCAGCTGGGGGATGTCGAATTGAAGGATATGTACGTGTCAAGAAGGTTCCAGGAAACTTGATCGTCTCAGCAAGATCTGATGCCCATTCCTTTGATGCTTCTCAAATGAACATGTCGCATGCCGTGCACCATTTATCTTTTGGCAGGAAACTGACACCTAGGGCTATGAGTGATCTCAAGCGTTTGATACCTTATATTGGTAACAGCCATGACAGGCTGAATGGTCTGTCATTCATCAATGCACATGATTTAGGAGCAAATATTACTGAATACTTATTGTTAATGGCAGGTTGTATTGACCTGCATGCATCTATGGAGCATTACCTTCAGATAGTTAAAACAGAAGTGATTACTAGAAAAGATTATCAATTAGTTGAGGAGTACGAGTACACAGCACATAGCAGTGTAGCACACAGTTTACAGATTCCTGTTGCGAGGTTCCATCTCGAGCTTTCCCCCATGCAGGTCTTGATAACAGAACATCAGAAGTCTTTTTCACATTTTATTACAAATGTCTGTGCTATTATTGGGGGTGTTTTCACGGTAGCTGGAATTGCGGAATCTATTTTGCACAACACTATTAGGCTAATGAAAAAAGTTGAGCTGGGCAAGAACTTTTGA 1488 0.4012 MTTTSRLKSVDFYRKIPRDLTEASLSGAGLSIVAALAMVFLFGMELNEYLSVTTSTSVIVDKSSDGDFLRIDFNFSFPALSCEFASVDVSDVLGTNRLNLTKTVRKFSIDSNLRPTGYEFHSGPSTNVIKHDDKVDEESLEGAFVFTSDNFDKYAHQFPITAINFYAPWCYWSQRLRPSWEKAAKIIRERYDPEMDGRIFLGKVDCTQEGDLCRRHHIQGYPSIRIFRKGTDIRSDHGHHEHESYYGDRDTDSLVKTMENLVASLPSESQKLALEDKLNVTENAKRAAPSAGGCRIEGYVRVKKVPGNLIVSARSDAHSFDASQMNMSHAVHHLSFGRKLTPRAMSDLKRLIPYIGNSHDRLNGLSFINAHDLGANITEYLLLMAGCIDLHASMEHYLQIVKTEVITRKDYQLVEEYEYTAHSSVAHSLQIPVARFHLELSPMQVLITEHQKSFSHFITNVCAIIGGVFTVAGIAESILHNTIRLMKKVELGKNF 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g03599 495 Gene3D Glutaredoxin 133 290 - -
Trre11g03599 495 FunFam Protein disulfide-isomerase 5-4 131 287 - -
Trre11g03599 495 Pfam Thioredoxin 145 243 IPR013766 -
Trre11g03599 495 SUPERFAMILY Thioredoxin-like 145 261 IPR036249 -
Trre11g03599 495 ProSiteProfiles Thioredoxin domain profile. 129 263 IPR013766 -
Trre11g03599 495 Pfam Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) 7 97 IPR039542 -
Trre11g03599 495 CDD PDI_a_family 145 258 - -
Trre11g03599 495 PANTHER ENDOPLASMIC RETICULUM-GOLGI INTERMEDIATE COMPARTMENT PROTEIN 5 494 IPR045888 -
Trre11g03599 495 Pfam Endoplasmic reticulum vesicle transporter 287 474 IPR012936 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g03599 Trre-Chr11 49245414 49253362 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g03599 - - gmx:100806869 837.795
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g03599 11 49245414 49253362 Trre11g03599 11 49245414 49253362 ECH