Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g03594 ATGGATGAACTCTTCGTAGCTATACTATCGATGCTTCTGGTAGCAGCACTAATCCCACTCTATCTATGGAAACGCCATCACGATTCTCAATCTTCTTCTTCATCTCACGATGAACCTCAACAGGCTCCGGTGAGAGAAACTGTTGTACGTGCCACTGCTACTCGTCGCATGCGTCGGAGACCGGCTGCATCTGGTGCTAGTACTTCATCGGCTCCTCCTGCAACGCAACAAGATTCTGCAGATGAAAGTGACAACGAAGCTGCTGGTGAGGAGTATGAGGCCAAAGCATCAAGGAAAAAGGAAATCAAAAGGCAAGAGAGGGAAGCTCGGCGGCAGGCTGAAGAAGCTACTCGAGAATCAAGGCAGTCAAAACAAGACCGTTATTCAGAAATGCGGAGGTTGAAGGATGAAGAGCGTGAGGCGCAGGAGCGTAAGTTGGAAGAAGAAGCTCAAGCTCAAAAGGCTAAGGAAGAGGAAGCTGCTGCGTTAGAATTTGAGAAGTGGAAAGGCGAATTTTCAGTTGATGATGAAGGTACACTTGAAGAGGAGCAAGACAAAACTGAAGACTTGCTTGCCAATTTTGTTGAATATATAAAGAAGCACAAATGTGTTCCCTTAGAAGATCTTGCTGCAGAATTTAAATTACGTACACAGGAATGTATCAATCGCATCACATCTCTGGAAAGTATGGGTCGGCTTTCGGGTGTCATGGATGATAGGGGGAAATTTATTTACATCTCACAAGAAGAGATGAAAGCTGTTGCTGATTATATTAAACGGCAAGGGAGGGTTAGCATTTCCCACTTAGCTAGTAAATCAAACCAGTTCATTGATTTAGAACCAAAGACTCATTATACTGAGGACATAAGTAACATTGAGGAGATAGCTGTCAACTGA 897 0.4426 MDELFVAILSMLLVAALIPLYLWKRHHDSQSSSSSHDEPQQAPVRETVVRATATRRMRRRPAASGASTSSAPPATQQDSADESDNEAAGEEYEAKASRKKEIKRQEREARRQAEEATRESRQSKQDRYSEMRRLKDEEREAQERKLEEEAQAQKAKEEEAAALEFEKWKGEFSVDDEGTLEEEQDKTEDLLANFVEYIKKHKCVPLEDLAAEFKLRTQECINRITSLESMGRLSGVMDDRGKFIYISQEEMKAVADYIKRQGRVSISHLASKSNQFIDLEPKTHYTEDISNIEEIAVN 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g03594 298 SUPERFAMILY "Winged helix" DNA-binding domain 184 254 IPR036390 -
Trre11g03594 298 Gene3D - 189 246 IPR036388 -
Trre11g03594 298 MobiDBLite consensus disorder prediction 89 152 - -
Trre11g03594 298 Pfam DDRGK domain 95 277 IPR019153 -
Trre11g03594 298 PANTHER DDRGK DOMAIN-CONTAINING PROTEIN 1 92 284 - -
Trre11g03594 298 MobiDBLite consensus disorder prediction 63 82 - -
Trre11g03594 298 FunFam DDRGK domain-containing protein 1 189 246 - -
Trre11g03594 298 MobiDBLite consensus disorder prediction 28 152 - -
Trre11g03594 298 SMART DDRGK_2 90 278 IPR019153 -
Trre11g03594 298 Coils Coil 92 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g03594 Trre-Chr11 49219692 49224910 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g03594 K23344 - gmx:100810584 373.629
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g03594 11 49219692 49224910 Trre11g03594 11 49219692 49224910 ECH