Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g03571 ATGCAGCTGCATATATCTCCTAGTTTGAGGCATGTTACTGTGCTACCAGGGAAAGGACTTAAAGAGTTTATCAAAGTGAAAGCTGTGTCGAAGCGTCTTTCTTATAGGATGATGTTCTATTCACTTTTGTTCTTCACTTTCCTTTTGAGGTTTGTGTTTGTTTTAACAGCTGTTGATGGCATTGATGGAGAAAACAAGTGCTCTACAATAGGTTGTCTAGGAAAAAAATTAGGACCAAGGATTTTGGGTAGACGACCTGAATCATCGGTCCCAGAAGTGATATACCAAACTTTAGATGAACCTCTTGGCAATGATGAATTAAAGGGAAGGTTTGATATTCCACAAACTTTAGAAGAGTTCATGATTAAAATGAAAGAAGGTGGACATGATGCAAAGACATTTGCAGTTAAACTTAGAGAAATGGTGACCCTTATGGAACAAAGGACTAGGTTGGCCAAAATCCAAGAATATCTATATCGCCATGTAGCGTCAAGCAGCATACCGAAACAAATTCATTGCCTTGACTTACGGTTGGCACATGAGCATACGAACAATGCGGCAGCACGCCTTCAGCTACCGTCTGCAGAACTAGTTCCTGCTCTTGTTGACAATTCCTATTTCCACTTTGTTCTAGCCTCAGATAATGTGCTAGCTGCCTCGGTGGTTGCAACATCACTTGTTCGCAACTGTTTACAACCTAGGAATGTTGTTATACATATCATTACAGACCGAAAGACTTATTATCCAATGCAGGCTTGGTTCTCGTTGCATCCTTTATCGCCTGCTGTGATTGAGGTCAAGGCATTGCACCATTTCGATTGGTTTTCAAAGGGAAAGGTTCCTGTTTTAGAAGCAATGGAAAAAGATCAGAAGGTTCGGTCGCAGTTTAGAGGAGGTTCATCGGCTATAGTTGCAAATACATCGGAGAAGCCAAACGTTATTGCATCAAAACTACAAGCACTTAGTCCCAAGTACAATTCAGTGATGAACCACATTCGGATACATCTACCGGAGTTGTTTCCAAGTCTTAACAAGTTGGTCTTCCTCGATGACGACATTGTGGTACAAACCGATCTTACACCTCTGTGGGACATTGACATGAATGGAAAAGTAAATGGAGCAGTGGAAACATGTAATGGAGAAGACAAGTTTGTGATGTCAAAGAGGTTGAAAAGCTATTTGAACTTTTCTCACCCTCTAATATCAAAAAATTTCAATCCTAATGAATGTGCTTGGGCCTATGGCATGAACATTTTTGATTTGGAGGCTTGGAGGAAGACCAATATAAGCAATACATATCATTATTGGGTTGGGCAGAACATTAAATCAGACCTGAGTTTGTGGCAGCTAGGGACATTACCTCCTGGATTGATAGCATTTCATGGTCATGTGCACATTATAGATCCTTTCTGGCATATGCTTGGATTAGGATATCAGGAAAACACAAATTTTGCCGATGTTGAGAATGCTGGTGTCATCCATTTCAATGGAAGGGCAAAGCCATGGCTAGACATTGCTTTTCCACAACTAAGGTCATTGTGGACAAAATATGTTGACTTCTCAGATAAGTTCATTAAAAGCTGTCACATTAGAGCATGA 1599 0.404 MQLHISPSLRHVTVLPGKGLKEFIKVKAVSKRLSYRMMFYSLLFFTFLLRFVFVLTAVDGIDGENKCSTIGCLGKKLGPRILGRRPESSVPEVIYQTLDEPLGNDELKGRFDIPQTLEEFMIKMKEGGHDAKTFAVKLREMVTLMEQRTRLAKIQEYLYRHVASSSIPKQIHCLDLRLAHEHTNNAAARLQLPSAELVPALVDNSYFHFVLASDNVLAASVVATSLVRNCLQPRNVVIHIITDRKTYYPMQAWFSLHPLSPAVIEVKALHHFDWFSKGKVPVLEAMEKDQKVRSQFRGGSSAIVANTSEKPNVIASKLQALSPKYNSVMNHIRIHLPELFPSLNKLVFLDDDIVVQTDLTPLWDIDMNGKVNGAVETCNGEDKFVMSKRLKSYLNFSHPLISKNFNPNECAWAYGMNIFDLEAWRKTNISNTYHYWVGQNIKSDLSLWQLGTLPPGLIAFHGHVHIIDPFWHMLGLGYQENTNFADVENAGVIHFNGRAKPWLDIAFPQLRSLWTKYVDFSDKFIKSCHIRA 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g03571 532 Pfam Glycosyl transferase family 8 210 506 IPR002495 GO:0016757
Trre11g03571 532 CDD GT8_like_1 207 519 - -
Trre11g03571 532 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 209 526 IPR029044 -
Trre11g03571 532 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 112 530 IPR029993 GO:0047262
Trre11g03571 532 SUPERFAMILY Nucleotide-diphospho-sugar transferases 208 530 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g03571 Trre-Chr11 48918293 48921126 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g03571 1 532 Glycosyltransferase AT5G54690 78.464 0.0 864
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g03571 K20867 - gmx:100802623 969.533
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g03571 11 48918293 48921126 Trre11g03571 11 48918293 48921126 ECH