Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g03563 ATGGCTAATTCTAACAAGAAAGTTGAGGTGATTTTAGATGATCAAACTCCAAATAAATGGTGTGTTTCATTAGGAGAAGAAACTTACAAAAGATTCATTAGCATGACTAATCCAACAGTTCATAAGGTTTTTGGTGATGGATCACTTTTTAGTCCAATGTTGTTTGGAAAATTCTTTGATCCTTCTGATGCATTTCCTCTATGGGAGTTTGAGTCAGATGTTTTGTTATCTCATCTAAGAAGCTCTAACAAAAGCACTGTGGATTGGTATCACATAGATGAAGGTTACATATTAAAAGCCGAAATACCGGGAAATGGGAAAAATAACATTCAAGTTCATGTTGACAAAGGGAAGGTGGTGGAAATTAGTGGAGCATGGAAGCAGCAAAGAGACTCAAAGGCAAATGATTGGAAATGTGGTCATTGGTGGGAAAATGGATATGTGAGAAGGCTTGAAATGCCAGAGGATGCAGATTGGAAGAATATACAAGCATTCATAATTAATGATATATTTTTAGAAATTCAAATACCAAAGATCAAAAAGGGTTTTGATCATGCTCAAGGAAAAGGTGTTGCTTGA 579 0.3541 MANSNKKVEVILDDQTPNKWCVSLGEETYKRFISMTNPTVHKVFGDGSLFSPMLFGKFFDPSDAFPLWEFESDVLLSHLRSSNKSTVDWYHIDEGYILKAEIPGNGKNNIQVHVDKGKVVEISGAWKQQRDSKANDWKCGHWWENGYVRRLEMPEDADWKNIQAFIINDIFLEIQIPKIKKGFDHAQGKGVA 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g03563 192 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 78 192 IPR002068 -
Trre11g03563 192 PANTHER 21.7 KDA CLASS VI HEAT SHOCK PROTEIN 4 185 - -
Trre11g03563 192 Gene3D - 49 186 IPR008978 -
Trre11g03563 192 Pfam Hsp20/alpha crystallin family 91 182 IPR002068 -
Trre11g03563 192 SUPERFAMILY HSP20-like chaperones 52 181 IPR008978 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g03563 Trre-Chr11 48843836 48845477 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g03563 - - gmx:100306244 330.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g03563 11 48843836 48845477 Trre11g03563 11 48843836 48845477 ECH