Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g03540 ATGGCTGTCAAACTTTACATTGTGTACTACTCCATGTATGGACATGTTGAGAAACTAGCAGAAGAAATAAAGAAAGGAGCTACTTCTGTCGAAGGCGTTGAGGCCAAATTATGGCAGGTACCTGAGACACTGCATGAGGAAGTGCTAGGTAAGATGAGTGCACCACCGAAGAGTGACGTACAAATCATCACGCCAGATGAACTCGCTGAGGCTGATGGTTTTGTGTTTGGATTCCCAACAAGATTTGGAATGATGGCTGCTCAATTCAAAGCTTTTCTAGATGCTACTGGTGGTTTATGGAGAGCACAAAAGCTTGCAGGCAAGCCTGCCGGAATCTTCTACAGCACCGGTTCTCAAGGCGGTGGACAAGAGACTACAGCGCTTACCGCTATTACTCAGCTGGTTCATCATGGAATGATATTTGTCCCAATCGGTTATACATTCGGAGCTGGAATGTTCGAGATGGAGCAAGTGAAAGGTGGAAGTCCATATGGTGCAGGAACATATGCCGGAGACGGATCAAGACAGCCAAGTGAGCTTGAACTGCAGCAAGCATTCCATCAAGGGAAATATCTTGCCACCATCACAAAGAAGCTCAAGGAAGCTGCATAA 612 0.4624 MAVKLYIVYYSMYGHVEKLAEEIKKGATSVEGVEAKLWQVPETLHEEVLGKMSAPPKSDVQIITPDELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRAQKLAGKPAGIFYSTGSQGGGQETTALTAITQLVHHGMIFVPIGYTFGAGMFEMEQVKGGSPYGAGTYAGDGSRQPSELELQQAFHQGKYLATITKKLKEAA 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g03540 203 Pfam NADPH-dependent FMN reductase 17 144 IPR005025 GO:0016491
Trre11g03540 203 NCBIfam NAD(P)H:quinone oxidoreductase, type IV 3 199 IPR010089 GO:0003955|GO:0010181
Trre11g03540 203 FunFam NAD(P)H dehydrogenase (Quinone) FQR1-like 1 201 - -
Trre11g03540 203 SUPERFAMILY Flavoproteins 4 200 IPR029039 -
Trre11g03540 203 ProSiteProfiles Flavodoxin-like domain profile. 5 192 IPR008254 GO:0010181
Trre11g03540 203 Gene3D - 1 201 IPR029039 -
Trre11g03540 203 PANTHER FLAVODOXIN-RELATED PROTEIN WRBA-RELATED 4 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g03540 Trre-Chr11 48347527 48349785 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g03540 K03809 - gmx:100499870 382.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g03540 11 48347527 48349785 Trre11g03540 11 48347527 48349785 ECH