Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g03385 ATGCCTTCTCTCCCTCCCAAATCATTCTTCAACTCACGTCAATCAATTTCATCCCGTAGATCCTCGTTGCTCATTCTCGCTTTTCTCTTCTTCGCAATTATCGTTTTTCTCAAACCATTTCGTGATAATCGCTGCATCAACACAAACCCTAGATCGGTTCGCGTCACATGGGATCGTAGCCCGGCAACCACCTCCGCCGGAAGAAATGTGGTTGCTGATGATAGACATAAGGTTATGGCTTTTGTCGGTATTCAGACCGGATTTCGATCCGTTGGACGCCGTCAATCTTTGAGGAAGACTTGGTTTCCTTCAGATCCTAATGGACTTCAACGCTTGGAAGAAGCCACTGGCTTGGCTTTTAGGTTTGTTATTGGTAGAACGAGTGATAAATCGAAGATGTCTGCACTTAAGAAGGAAATAGCTGAATATGATGATTTCATTCAATTGGATATTGAAGAGGAGTACAGTAAGCTCCCATACAAAACGTTGGCTTTCTTCAAAGCTGCTTATGCTCTTTTTGATGCTGAATTTTATGTCAAAGCTGATGATGACATATATTTAAGGCCAGATCGTCTTTCATTACTAATTGCAAAAGAGAGATCTCATTCCCAGACATACATAGGATGCATGAAAAAGGGCCCTGTTTTCACTGATCCGAAACTCAAATGGTATGAGCCACTATCTAATTTGCTTGGAAAGGAGTATTTCCTTCATGCTTATGGTCCTATATATGCTCTTTCTGCTGATGTTGTACAAAGCTTGGTCGCTCTTAAGAATAACAGTTTTCGGATGTTCAGCAATGAGGATGTTACCATTGGAGCTTGGATGCTTGCAATGAATGTCAACCATGAGAATATTCATGAACTTTGTTCTCCAGAGTGTACATCGACATCAATTGCTGTTTGGGATATTCCAAAGTGTTCAGGCCTCTGTAATCCAGAAAAGAGAATGTTGGAACTTCATCAAATGGACAGCTGCACTCAGAGTCCCACAATGGAATCTGATGAATAG 1011 0.4144 MPSLPPKSFFNSRQSISSRRSSLLILAFLFFAIIVFLKPFRDNRCINTNPRSVRVTWDRSPATTSAGRNVVADDRHKVMAFVGIQTGFRSVGRRQSLRKTWFPSDPNGLQRLEEATGLAFRFVIGRTSDKSKMSALKKEIAEYDDFIQLDIEEEYSKLPYKTLAFFKAAYALFDAEFYVKADDDIYLRPDRLSLLIAKERSHSQTYIGCMKKGPVFTDPKLKWYEPLSNLLGKEYFLHAYGPIYALSADVVQSLVALKNNSFRMFSNEDVTIGAWMLAMNVNHENIHELCSPECTSTSIAVWDIPKCSGLCNPEKRMLELHQMDSCTQSPTMESDE 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g03385 336 Pfam Galactosyltransferase 93 286 IPR002659 GO:0006486|GO:0016020|GO:0016758
Trre11g03385 336 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 65 290 IPR002659 GO:0006486|GO:0016020|GO:0016758
Trre11g03385 336 FunFam Hexosyltransferase 77 308 - -
Trre11g03385 336 Gene3D - 75 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g03385 Trre-Chr11 45958585 45965266 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g03385 6 336 Glycosyltransferase AT1G53290 70.845 0.0 508
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g03385 - - gmx:100804717 528.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g03385 11 45958585 45965266 Trre11g03385 11 45958585 45965266 ECH