Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g03373 ATGATAGAAAGGAAGTGCCGCATCATCTGGTTGACATACGCCACCCATCTGAAGTTTTTTGAGGATGCAAGGCAAGCGACAAGGTCTATTCTTGACAACGGCCGTGTTCCAATAGTTGTTGGGGGAACTGGATTGTATTTAAGATGGTTCATATATGGAAAGCCAGATGTGCCTAAGTCCTCTGTAGAGATAACATCTCAAGTTTGTATGGAGTTAGCTGAACTACAGAGACATAATGACTGGGAAGCTGCTGTGCAGTTGGTGGTAAAAGCAGGTGATCCAAAGGTCCAACATATAGCAGTGAATGATTGGTACCGATTACGGCGTAGTCTAGAGATTATTAAGTCTAGTGGATCACCTCCTTCAGCTTTTCGGGTACCATATGATTCTTTCAGGAAACAGGGTGATTGTAGAGTTGCTGATAGTTCTGATTCAGCTGATATGAATACTTATAATGATGCAGTCAAAGAAACTGCGGATTCAGCAAAGTTAGATTACGAGTTCATGTGTTTTTTCCTTTCTAGTGACAGACTTGACCTCTATAGATCAATTGATTGTCGGTGTGAAGATATGCTATTAGGAGGAGATAGCATTTTGTCTGAGGCTCAGTGGCTTCTTGATACCGGTCTTCATCCAAACTCCAACTCTGCAACAAAAGCAATTGGTTATAGACAGGCCACCGAGTACTTACTAGGATGCAGACAACAAGGGGGTCAGAGTTCAGCTGGAGAATTTTACAGATTTTTGTCTGAATTTCAAAAAGCATCACGGAATTTCGCAAAACGGCAGTTGACTTGGTTTCGCAATGAGCGTATATACCATTGGCTTGATGCTTCTGAACCTCTGGAAACTATTCTGAACTTCATTCATGATGCATACCATGATCGGAATGGAAGTCTATTTGTGCCTGAACACCTTAGAATGCCAAGAGATATTTCTAATTCCCGAATAGCTGGTAAACTAAAGGCTTACCGCACCAGAAATAGGCATTTTGTGGATGGGGAAGATTGTTATCCTATTTTGGAATGGATAAAGAAGACCCAAAAGTGA 1050 0.4152 MIERKCRIIWLTYATHLKFFEDARQATRSILDNGRVPIVVGGTGLYLRWFIYGKPDVPKSSVEITSQVCMELAELQRHNDWEAAVQLVVKAGDPKVQHIAVNDWYRLRRSLEIIKSSGSPPSAFRVPYDSFRKQGDCRVADSSDSADMNTYNDAVKETADSAKLDYEFMCFFLSSDRLDLYRSIDCRCEDMLLGGDSILSEAQWLLDTGLHPNSNSATKAIGYRQATEYLLGCRQQGGQSSAGEFYRFLSEFQKASRNFAKRQLTWFRNERIYHWLDASEPLETILNFIHDAYHDRNGSLFVPEHLRMPRDISNSRIAGKLKAYRTRNRHFVDGEDCYPILEWIKKTQK 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g03373 349 Gene3D - 12 313 IPR027417 -
Trre11g03373 349 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 15 280 IPR039657 -
Trre11g03373 349 Gene3D - 56 126 - -
Trre11g03373 349 FunFam tRNA dimethylallyltransferase 9 55 126 - -
Trre11g03373 349 Pfam IPP transferase 18 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g03373 Trre-Chr11 45809110 45813198 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g03373 K00791 - gmx:100808814 540.036
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g03373 11 45809110 45813198 Trre11g03373 11 45809110 45813198 ECH