Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g03346 ATGGATGAAATCAATCACAATAACAACAATGGCTACGCCACACCGAAGAAATCGACCCCCGGTAGCAAGAGAAAGGCCGCCGCCGCCTACAAGCACGACGATACTAGCCAACTGTCGGCGAGGAAAAAGAAAGAGATGAGAATCCGTTTATCGTTAACAAGACCTTCTTACGTTCTTGGACTCTGTACTAAACCTCTTAGATCGGAACATCGTCGTAGATTGCATTACTTGCTTCGCAAGCTTGTTAATCAACATGATTGGGTTGGTGCTAGTGGTGTTATGAGTGTTTACTTGAAAGGAACTGTTAATGATACTTCTCCTTTGAAGAATCGTTTCAAGTTTTGGGTTTTACTGGAGCTTCTTAAGCATGTCGAAGACCATTCCAGGAATTCAACAAGGATCAGGAATCTCTATGACATTTGGGCAAAGAAGATTGGATCAATGAAGACTTGGCCATTAGAGAGCAGATATGCAGTTCAGTTGGAGTTCATGTTGTTCTATCTTATGCAAGGCAATGTTGAGGGTGCATATCAGCTTGCTCTAGTCCTTGAGCAAGAAAAAGTTGATATTGATCCTGTTTCGAAGATGATGATGGGTTTGACATTCTATGAGCTGTGGTATTCTTCTTCTATTCCTGACGAATTTAAGTGGAGAGATTTAGATCAAATTGAAGGTCAAGAGGACTCGCATACAGAGGGAACCTCATTCAGCAACAAGGCTGGACCGTCAGAATGGCATAATTCAGTTCAGTCGCACATGGCAGACTCCCAATACCGATGTGACTCAGATTCATCTGTCATGAATAATAGACAAATTTCTAAGGAGATTGGCCTCAATAAAGGTATGATTGTTGCCATGGAGGTTGATGCTAACCATAAAAGAGAAAAATCACATCATATCATTCAGCCGGAAAATTTTTACATTTCTGATGAAAGTCAAGAAATAGAAGACCCGTCTAACATTCGGGTTCTTACACAAGATGACTTGTATGCTCTTGGGAGACTTGATTTGTGGCTGCCATTGCGTTTTTCGGATGTGAACGGTTTGTTGAAGATCAAGTTTAATGACTACTATAACAGTGCATTAAAGTATTTACATCTAGCTCTGGATTCAACATCCGTTGCATCAGCAGCATTACTTCCATTAATACAGCTGTTGCTGATTGGAGGTGAAGTTGATGAAGCTCTAACTTTGCTTGAGAACCAGTGCAATAGTTCACACTCTGTACTCCCAATTAGATTACGAGCTGCTCTATTGGAGCATTTTGATCGAAACAACTCTCTCTTAATTTCAAGCTGTTATGAGGATATACTAAAGAAGGATCCAACATGTCGTGACTCTTTAGCAAAACTTATAAGGATGCACCAAATAGGGGAATATAGTCTTGAATCTCTTCTGGAAATTATTGCTTTACATTTAGATGCTACAGATGCCGAGTACAATACATGGAAGGTGTTCTCTTTATGTTTTTCTAAATTGTCTCTCCATGAAGAAGACCAAATGTCTACATGCTATGAAAATGGACAGGTGCAACATTCTTCCATTCGCAAAACCCCAAAAATATTTACAGAGGGTATATCAGCAAAATCTTGGAATCTTCGCTGTCGGTGGTGGCTAACGAGATATTTCAGCAATAGCAAATTTGAATCAGATATTAAAACTGGTGATTTACAGTTACTCACATACAAAGCAGCATGTGCATTGTACATGTATGGTCAAGAGTTCAACTATGTTGTGAAGGTCTATTCTCATTTAAAAAAAGAAAATGACAAGGATTTGTTGCTATTCTTGAATGGGCACAAGAGAAATTCATATGTAATTTATGTCAAAAATTCAAAGAAAGCTTCATGTATAAGATTATAA 1863 0.3886 MDEINHNNNNGYATPKKSTPGSKRKAAAAYKHDDTSQLSARKKKEMRIRLSLTRPSYVLGLCTKPLRSEHRRRLHYLLRKLVNQHDWVGASGVMSVYLKGTVNDTSPLKNRFKFWVLLELLKHVEDHSRNSTRIRNLYDIWAKKIGSMKTWPLESRYAVQLEFMLFYLMQGNVEGAYQLALVLEQEKVDIDPVSKMMMGLTFYELWYSSSIPDEFKWRDLDQIEGQEDSHTEGTSFSNKAGPSEWHNSVQSHMADSQYRCDSDSSVMNNRQISKEIGLNKGMIVAMEVDANHKREKSHHIIQPENFYISDESQEIEDPSNIRVLTQDDLYALGRLDLWLPLRFSDVNGLLKIKFNDYYNSALKYLHLALDSTSVASAALLPLIQLLLIGGEVDEALTLLENQCNSSHSVLPIRLRAALLEHFDRNNSLLISSCYEDILKKDPTCRDSLAKLIRMHQIGEYSLESLLEIIALHLDATDAEYNTWKVFSLCFSKLSLHEEDQMSTCYENGQVQHSSIRKTPKIFTEGISAKSWNLRCRWWLTRYFSNSKFESDIKTGDLQLLTYKAACALYMYGQEFNYVVKVYSHLKKENDKDLLLFLNGHKRNSYVIYVKNSKKASCIRL 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g03346 620 MobiDBLite consensus disorder prediction 1 42 - -
Trre11g03346 620 PANTHER TAF RNA POLYMERASE I SUBUNIT A 14 614 - -
Trre11g03346 620 MobiDBLite consensus disorder prediction 1 17 - -
Trre11g03346 620 Pfam TAF RNA Polymerase I subunit A 80 583 IPR039495 GO:0000120|GO:0006360
Trre11g03346 620 MobiDBLite consensus disorder prediction 224 248 - -
Trre11g03346 620 MobiDBLite consensus disorder prediction 26 42 - -
Trre11g03346 620 MobiDBLite consensus disorder prediction 229 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g03346 Trre-Chr11 45505148 45513428 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g03346 - - cam:101507338 863.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g03346 11 45505148 45513428 Trre11g03346 11 45505148 45513428 ECH