LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Trre11g03329	ATGGAAACAGAAAAACATCATCGTACAACAAGTAACAATAGTAGCACAAGTGAACTCTTTGTTTGTTTCACATCACGTTTATCATCTTCATCAATGAAACTGTCATCAAAATCAATCTTAAGTCCAAGCCGTAGCAGAGACCAACCACAGATATCACTTTCATCTTCTTTAAGCAGAAGATTAAAGAGCAATGGTAGCATGAAAGGTGGTCAAGCTTCACCAATGTTTCCAACTGGTGGAAAGAAAAGAGGATGTGGTTTTGAGAATCCAGAGCCTTCATCTCCTAAAGTTACTTGCATTGGACAAGTTAGAGTGAAGACAAAGAAACAAGGGAAGAAAATGAGGTCAAGATCAAAGAGAAGAGGTGAAGCTAGTTTCAGAAGAGGTGAAGCTAGTTTCAGAAGAGGTGAAAACAATCCAGATCTAACTAGACAGAACAGTCAAAGTTTGTATCAAAATCATCAAAATTTGCAACAAGAATGTTTGAAACATAGGAATCAAAGATGGGTTCATTTGCCTTTAACAATATGTGAAGCTTTAAGAGAATTTAGTTGCTTTTTTCCTTGTAGGTCTTCTTGTATGTCAAATGAAAGGGAGAAAGAAGAAAAGGGTAGTAGTATTTTAGAAGGAAGAGGAGAAGGAGAAAGAGAAAGAGAAAGATCTGGTGGTGGACATGGTAGAGAAGGTTCATGTGGAGCTGCATTTGCTAGATGGTTAGTGGCTTATGATGGAAAAGGTAGAGAGATTGAGGTTATGATGGAACATCATGAGATGGAGATGGAAATGGATGATGATGAAGATGTTGATGTTGATGGAAGAGAGAAAGGTGAAAGGAGTTATAGTCAAAGGAGACATATTTTTGAAGATCTTGATATTGATTTCGTTGATGAGAAGATACAACAAGAACAATTTCAAGGTGAAGAAGAAGAAGAAGAAGAAGAAGTACAAGAGAAAGAAAAAGGAAGAGTTAGCATTTGTGTTCCACCAAAGAATGCTCTTTTATTGATGAGGTGTAGATCTGATCCTGTCAAAATGGCTGCTTTGGCTAATCGTTTTTGGGAATCACCTATTCACAAAGAACAAGAATATCACAATGAAGTTGATGAACAAGAAGAATCTAGTGGAGATGAAGATGATGAAGAAGAACAAGAACAAGAACAAGAACAAGGTTACTATAAAGAACAAAACATTGAAATGGAACAAGTTGAAGAAGAACCACAACAATTGGTTGAAGTGGTGGAAACAATGTTACAAATGGAAGGCAAAAGAGACCAAGAAGTTGATGAAGAAATCAACAAGGAAGAGGAAGAGAAAAATGAAGATAAAGATGAAATCTTTACATGTGTTTTACTTGATTCATCTCATGCAGATCTTGAAAAACAAGAAATAGAAGAAACCCATCAAGAAGAACATGAAGAGAAGCAAGAAAACAAAGAAAGTTCAGAACTTTTTTCTTCTACTTCATCTTCTTCTACTACTTCACCTGAAACATTTTTAGCTTCATCAGAACAAGAAAATACCAATGAACAAGATACAGAATCAGAATCAGAAAATGCTGAAAAAGTTTCAACGGAGGAAGAACAAGAAGAGAAAGTGACCGTAGCAGAGAGGGAACAGGATCCGACCCAACAAGAATCCGACCCGGAAATGGGTCTAATCGGGTCAACGGAGCGAGAAAATGGGTCAAAGAAAGAAGAGAGAGAAAGAGAAACATTACCTGAATGCTTGTTACTGATGATGTGTGAGCCGAAGCTATCAATGGAAGTGTCAAAAGAAACATGGGTATGTAGCACTGATTTTATACGGTGGTTACCGGAAAGACCCGTCGGAAAAGTCGCCGGAGGAGAGAAAAAGGTGACAGTGGAGTCATCATCTTCTTCGTCGTGTTCTAAGCCGAAGGTGAAAGTGAAGTCTGTTCAGCCGTTGATGCAGCCGCCGAGATCTTCATGTTCTTTTCCGGTGACCGGAAGTGGTGCCGGAATGTCAATGGCGACAATGATTGAGCAGAAGTTGATGGGGTGTTCAAAATCTCGTAATGGGTACGAGCCGTTTGTTCTTAAGCGCTGTAAGTCAGAGCCGATGAGGTCGGCGACTAAGCTTGCGCCGGAGGCTTGTTTCTGGAATAATCGGAAACTTGAGCCGCATCCGCCTCCGGCTTCCCTTGGCGTCGGCGCGCCGGCTGGTGTTGGGTTTTGA	2196	0.398	METEKHHRTTSNNSSTSELFVCFTSRLSSSSMKLSSKSILSPSRSRDQPQISLSSSLSRRLKSNGSMKGGQASPMFPTGGKKRGCGFENPEPSSPKVTCIGQVRVKTKKQGKKMRSRSKRRGEASFRRGEASFRRGENNPDLTRQNSQSLYQNHQNLQQECLKHRNQRWVHLPLTICEALREFSCFFPCRSSCMSNEREKEEKGSSILEGRGEGERERERSGGGHGREGSCGAAFARWLVAYDGKGREIEVMMEHHEMEMEMDDDEDVDVDGREKGERSYSQRRHIFEDLDIDFVDEKIQQEQFQGEEEEEEEEVQEKEKGRVSICVPPKNALLLMRCRSDPVKMAALANRFWESPIHKEQEYHNEVDEQEESSGDEDDEEEQEQEQEQGYYKEQNIEMEQVEEEPQQLVEVVETMLQMEGKRDQEVDEEINKEEEEKNEDKDEIFTCVLLDSSHADLEKQEIEETHQEEHEEKQENKESSELFSSTSSSSTTSPETFLASSEQENTNEQDTESESENAEKVSTEEEQEEKVTVAEREQDPTQQESDPEMGLIGSTERENGSKKEERERETLPECLLLMMCEPKLSMEVSKETWVCSTDFIRWLPERPVGKVAGGEKKVTVESSSSSSCSKPKVKVKSVQPLMQPPRSSCSFPVTGSGAGMSMATMIEQKLMGCSKSRNGYEPFVLKRCKSEPMRSATKLAPEACFWNNRKLEPHPPPASLGVGAPAGVGF	731

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Trre11g03329	731	MobiDBLite	consensus disorder prediction	514	544	-	-
	Trre11g03329	731	MobiDBLite	consensus disorder prediction	359	570	-	-
	Trre11g03329	731	MobiDBLite	consensus disorder prediction	33	145	-	-
	Trre11g03329	731	MobiDBLite	consensus disorder prediction	622	642	-	-
	Trre11g03329	731	MobiDBLite	consensus disorder prediction	260	280	-	-
	Trre11g03329	731	MobiDBLite	consensus disorder prediction	198	229	-	-
	Trre11g03329	731	MobiDBLite	consensus disorder prediction	106	122	-	-
	Trre11g03329	731	MobiDBLite	consensus disorder prediction	198	225	-	-
	Trre11g03329	731	Coils	Coil	456	480	-	-
	Trre11g03329	731	MobiDBLite	consensus disorder prediction	33	71	-	-
	Trre11g03329	731	PANTHER	CHLOROPLAST PROTEIN HCF243-RELATED	14	407	-	-
	Trre11g03329	731	Coils	Coil	509	529	-	-
	Trre11g03329	731	MobiDBLite	consensus disorder prediction	455	480	-	-
	Trre11g03329	731	MobiDBLite	consensus disorder prediction	302	321	-	-
	Trre11g03329	731	MobiDBLite	consensus disorder prediction	123	137	-	-
	Trre11g03329	731	Coils	Coil	301	321	-	-
	Trre11g03329	731	MobiDBLite	consensus disorder prediction	481	507	-	-
	Trre11g03329	731	MobiDBLite	consensus disorder prediction	369	387	-	-
	Trre11g03329	731	Coils	Coil	424	444	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Trre11g03329	Trre-Chr11	45338127	45340322	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Trre11g03329	-		-	mtr:25487287	853.203

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Trre11g03329	11	45338127	45340322	Trre11g03329	11	45338127	45340322	ECH