Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g03201 ATGGCTTCCAAATTGTTACTCATCATTGTCTTTGTTTTTGACTTGATTGCTTTTGGTCTTGCTGTTGCTGCTGAACAAAGAAGAAGCACCGCTAAGATTGTTCCAGATAGGGACCTAAATTATAACTACTGTGTCTATAACTCGGATATAGCAACCGGCTATGGTGTTGGAGCATTTCTATTCCTCATGGTTAGCCAAATCGCCATAATGGTTGCAAGTCGATGCTTCTGTTGTGGGAAACCTCTAAAGCCTGGAGGCTCAAGAGCTTGTGCAGTTATTCTTTTCATAATCTGCTGGGTGTTTTTCTTGATAGCTGAAATATGTGTGTTGGCTGGATCAGTTGAAAATGCTTATCACACAAAGTACAGAACCCTCTTTGTGAACAATCCTCCTTCTTGTGAGACAGTAAGGAAGGGAGTTTTCGCTGCCGGTGCTGCTTTCATTTTCTTCACTTCCATCGTTTCGAAATTCTACTATATCAACTACTCAAGCGCAAGGGAAAGTTTCCAACCGCATCTTGGAGGCGAGACTGGCCTCGGCATGGGAACCTACAAATAA 558 0.4265 MASKLLLIIVFVFDLIAFGLAVAAEQRRSTAKIVPDRDLNYNYCVYNSDIATGYGVGAFLFLMVSQIAIMVASRCFCCGKPLKPGGSRACAVILFIICWVFFLIAEICVLAGSVENAYHTKYRTLFVNNPPSCETVRKGVFAAGAAFIFFTSIVSKFYYINYSSARESFQPHLGGETGLGMGTYK 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g03201 185 Pfam Protein of unknown function (DUF1218) 58 152 IPR009606 -
Trre11g03201 185 PANTHER OS07G0462200 PROTEIN-RELATED 8 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g03201 Trre-Chr11 43539872 43542032 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g03201 - - gmx:100499677 322.783
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g03201 11 43539872 43542032 Trre11g03201 11 43539872 43542032 ECH