Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g03186 ATGGCGTCAGTTCACAGCACCGTGCCTCACCACAGTTGCTTACCTTCAATTTCCAAAGCAAAATCAAAATCCATTTCTAAGGTGCAAAACTTTCCGACGTCGAGATTTTCCGTCAATTCGAATTTCTCGAGAAACAAACGAACAGTACTAGCGACGAAATTATCGACGGAGGAGTTCGATGTGATAGAAATTCAGAGTAACGATATTACGAACCAGCCAGAAGGTTTGATAGTGAGTCGTGTGGAAATGGAAGGTGGAGATGGTGAATTAGCGACGCAGATGAATGGATTTGGAGCGAATGAGGGTTTGTTATCGTTGGAAGGGTTTTCTTCTTCTTCTTCTACTTCGGGTTTGGTTGGTAATGAGAATGAAGAGAGTGTTGAGAAGCTTCTAGATAGGAGTATTAATGCTAGTATTGTTCTTGCTGCTGGTACTTTTGCTCTTACTAAGCTTCTTACCATTGATAGTGATTATTGGCATGGATGGACAATCTATGAGATAGTAAGATATGCACCTCTGCACAACTGGTTGGCTTATGAGGAAGCTCTTAAGACAAATCCAGTTTTTGCCAAGATGGTGATTAGTGGAGTTGTTTATTCTGTAGGAGACTGGATTGCACAGTGCTTTGAAGGAAAGCCTCTTTTTGAGTTTGATCGGGCACGGATGTTCAGATCAGGGCTTGTTGGTTTTGCTCTACACGGCTCTCTTTCTCATTATTATTACCAGTTTTGTGAGGAGCTATTTCCTTACAAAGAATGGTGGGTGGTTCCTGTCAAAGTTGCCTTCGATCAAACTGCATGGTCGGCAGTTTGGAACAGCATCTATTATACGGTTGTCGCGATCCTGCGTCTTGATTCTCCGATTAATATTTTCAATGAATTGACGGCAACATTTTTCCCCATGTTGACTGCAGGATGGAAACTGTGGCCATTTGCTCATCTAATTACGTACGGTGTAATACCAGTCGAGCAAAGACTTCTTTGGGTGGATATGATAGAGCTTATTTGGGTGACCATACTTTCTACATATTCAAATGAAAAATCAGAAGCAAGAAGCTCATCGGTGCCTATAGAAGTGAATTCCACTACATCTGAGGTATATGATAAACTAATAGTAATTTATTACATGAACTTGTTTCCAAACTTTGGTTAA 1152 0.4089 MASVHSTVPHHSCLPSISKAKSKSISKVQNFPTSRFSVNSNFSRNKRTVLATKLSTEEFDVIEIQSNDITNQPEGLIVSRVEMEGGDGELATQMNGFGANEGLLSLEGFSSSSSTSGLVGNENEESVEKLLDRSINASIVLAAGTFALTKLLTIDSDYWHGWTIYEIVRYAPLHNWLAYEEALKTNPVFAKMVISGVVYSVGDWIAQCFEGKPLFEFDRARMFRSGLVGFALHGSLSHYYYQFCEELFPYKEWWVVPVKVAFDQTAWSAVWNSIYYTVVAILRLDSPINIFNELTATFFPMLTAGWKLWPFAHLITYGVIPVEQRLLWVDMIELIWVTILSTYSNEKSEARSSSVPIEVNSTTSEVYDKLIVIYYMNLFPNFG 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g03186 383 PANTHER PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17 175 342 IPR007248 GO:0016020
Trre11g03186 383 Pfam Mpv17 / PMP22 family 286 341 IPR007248 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g03186 Trre-Chr11 43311536 43314099 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g03186 179 349 Miscellaneous Gene Families AT2G14860 26.901 4.44e-14 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g03186 K13348 - gmx:100805057 536.184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g03186 11 43311536 43314099 Trre11g03186 11 43311536 43314099 ECH